Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00574 ATGAGGCTTGAACGTTCGAGGAACAAAGCTCTTGACCCTGAGGGGCCATTCTTAAGGAAATGGAACAGAATATTTGTGTGCACAAGTTTGATAGCAGTCTCTGTTGACTTACTCTTCTTCTACATCCCTGTGCTCAATGAGCAAGAAAAATGCCTAGATTGGGATGGAACCTTGAAGGTTATTGGATGTGTTCTTCGTTCAGTCCTCGATCTTATTTATGTTCTTCATATCATCTTTCAGTTTCGCACCGGGTTTATTGCGCCTTCTTCTAGAGTATCTGGAAGGGGTGAGCTCGTTGCTGATTCTGTGGCTATAGTGAAAAAATACTTATTTGGGTACTTTGTCATTCATATTCTATCAATCATTCCACTACCACAGATGTTTGTTTTAGGTATCATTCCGATTCTGAAGAGCTCAGTTCCATTTGGCCAGATTGACTTGTTGAAGATCATAATAATTGTCCAGCATTTGCCAAGAGTTATACGTATCTACCCAATATGGAAACAGATGCGTAGAACATCTGCAATATTGACTGGATCAGGGACAGCATGGTCTGCTGCTGCTCCTAATCTTCTTTTCTATATTCTAGCAAGTCATATTGTTGGATCTTCCTATTACCTGTTTTCAGTAGAATCCGAACTTCGCTGCTGGCAACAAGAGTTGAAGAATTCTAAATTGTACAATATTGTGCTCTCTCATGATGTTTCCTTTAGCTGCGGACAACACAAACAAACCATTCTTTCACTTCTCAATACTTCTTGCTTTTTCATTGATGCTAATGAAATGAAAGATCCAACAGCCTTCGATTTTGGAATCTTTAAAGAAGCTCTATCGTCTCATGTGGTAGAATCAAGTACCAAGTTCCTTCAGAAGTTCTTTTACTGCTTTTGGTGGGGTTTGCGCAATATCAGAATTGTGAGAGAAGAAGAGATGATGGTGAAATCCCAGGACACAGAGCGGTGGATGTCCCACCGCATGCTACCTGATGATTTAAGGGAAAGAATTAGAAGGTATGAACGTTACAAATGGCAAGAAAATGGGGGTGTTGACGAGGAAACATTAATTCGCAACCTTCCAAAAGATCTCAGAAGGGATATAAAGCGTCATCTTGGCTGGCATTTGCTTAGAAAAGTGCCAATGTTAGAGCAATTGGATGAAGGGTTGTTGGACGAGATGATTGAGAGATTGAAGCCAATCCTATACACTGAAAGGAACTACATTGTTTGCGAAGGAGATCCAGTTGATGAAATGCTCTTCATTATGCAAGGAAAGCTTGAAACTGTGACCACAAATGGTGGAAGAACTGGTTTCTTCAATAGGGCATTTCTTAAGGCAGGTGACTTCTGCGGAGAAGAGCTTTTAACATGGGTCTTGGACCCCAAGTCCTCATCACGTCTTCCCATCTCAACCAGAACAGTCCAAACGCTATCAGAAGTTGAGGCTTTCGCTCTCACGCTTGATGATTTAAAGTTTGTTGCTTCCCAATTCCTAAGTCTCCACAGCAAGCGAATTCAGCACACTTTCAGGCAAGGCTTAGTGCCAATGTTAGAGCAATTGGATGAACAGCTGTTGGATGCGATGAGTGATAGATTGAAGCCAATTCTGTACATTGAAAACAGCTACATTGTTCGCGAAGGCGTTCCAGTTGATGAAATGCTCTTCATTATGCGAGGAAAGCTTAGAACTATGACCACAAATGGTGGAAGAACTGGTTTCTTAAACTCCTTTGAACTTAAGGCAGGTGACCTCTGTGGAGAAGAGCTTCTAACATGGGCATTGGACCCCAAGTCGTCGTCACGTCTTCCCATCTCAACCAGAACAGTAAAACTATATCAGAAGTTGAGGCTTTTGCTCTCATGCCTGATGATTTGA 1872 0.4167 MRLERSRNKALDPEGPFLRKWNRIFVCTSLIAVSVDLLFFYIPVLNEQEKCLDWDGTLKVIGCVLRSVLDLIYVLHIIFQFRTGFIAPSSRVSGRGELVADSVAIVKKYLFGYFVIHILSIIPLPQMFVLGIIPILKSSVPFGQIDLLKIIIIVQHLPRVIRIYPIWKQMRRTSAILTGSGTAWSAAAPNLLFYILASHIVGSSYYLFSVESELRCWQQELKNSKLYNIVLSHDVSFSCGQHKQTILSLLNTSCFFIDANEMKDPTAFDFGIFKEALSSHVVESSTKFLQKFFYCFWWGLRNIRIVREEEMMVKSQDTERWMSHRMLPDDLRERIRRYERYKWQENGGVDEETLIRNLPKDLRRDIKRHLGWHLLRKVPMLEQLDEGLLDEMIERLKPILYTERNYIVCEGDPVDEMLFIMQGKLETVTTNGGRTGFFNRAFLKAGDFCGEELLTWVLDPKSSSRLPISTRTVQTLSEVEAFALTLDDLKFVASQFLSLHSKRIQHTFRQGLVPMLEQLDEQLLDAMSDRLKPILYIENSYIVREGVPVDEMLFIMRGKLRTMTTNGGRTGFLNSFELKAGDLCGEELLTWALDPKSSSRLPISTRTVKLYQKLRLLLSCLMI 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00574 623 SMART cnmp_10 515 618 IPR000595 -
Bach6g00574 623 SMART cnmp_10 380 508 IPR000595 -
Bach6g00574 623 CDD CAP_ED 380 499 IPR000595 -
Bach6g00574 623 FunFam Cyclic nucleotide-gated ion channel 1 307 371 - -
Bach6g00574 623 ProSiteProfiles cAMP/cGMP binding motif profile. 515 599 IPR000595 -
Bach6g00574 623 CDD CAP_ED 515 589 IPR000595 -
Bach6g00574 623 Gene3D Helix hairpin bin 306 370 - -
Bach6g00574 623 SUPERFAMILY cAMP-binding domain-like 308 502 IPR018490 -
Bach6g00574 623 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 5 303 - -
Bach6g00574 623 FunFam Cyclic nucleotide-gated ion channel 1 378 496 - -
Bach6g00574 623 Gene3D Jelly Rolls 378 497 IPR014710 -
Bach6g00574 623 Gene3D Jelly Rolls 513 620 IPR014710 -
Bach6g00574 623 ProSiteProfiles cAMP/cGMP binding motif profile. 380 464 IPR000595 -
Bach6g00574 623 SUPERFAMILY cAMP-binding domain-like 513 609 IPR018490 -
Bach6g00574 623 SUPERFAMILY Voltage-gated potassium channels 13 300 - -
Bach6g00574 623 Pfam Ion transport protein 21 322 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bach6g00574 623 Pfam Cyclic nucleotide-binding domain 401 491 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00574 Bach-Chr6 4218832 4224299 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00574 513 609 Ion Channels AT5G53130 80.412 2.01e-43 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00574 K05391 - qsa:O6P43_017768 646.351