Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00573 ATGTTGGCTTCTAGGAACAAAATTTTTGATCCTCAGGATCCAGCCTTCAGGAGATGGAGCGGAATATTTGTATTCACATGTTTGGTAGCAATCTCTGTTGACTTACTCTTCTTCTATATCCCCGAGATCAATGAGCACGAAAAATGCCTAGATTTGGATGGAGGCTTGAAGATTACTGTATGTGTTCTTCGTTCAATCTTTGATCTTATTTATGTTCTTCATATCATCTTTCAGCTTCGCGCTGGGTTTATTGCGTCTTCTTCTGGGTACTTTGTCATTGACATTCTATCAATCATTCCACTACCACAGGTGTTTGTTTTAGGTATCATTCCGATTCTGAAAAGCTCAGTTCCATTTGGCATGATTGACTTCTTGAAGATCATAATATTTGTCCAGTATTTGCCAAGAGTTATACGGATCTATCCTAAATGGAAACAGATGCCTAGAAAATCTGCAATATTGACTGGATCACGGACAGCATGGTCTGCTGCTGCTTCTAATCTTCTGTTCTATATTCTAGCAAGTCATATTGTTGGATCTTCCTATTACCTGTTTTCAGTAGAATCTGAGCTTCGCTGCTGGCGACAAGAGTTGAAGAATTCTAAATTGTACAATGTTGTGCTCTCTCATGATGTTTCCTTTAGCTGTGGACAACACAAACAAACTATTCCTTCACTTCTCAATACTTCTTGCTTTTTCATTGATGCTAATGAATTGAAAGATCCAACAGCCTTCGATTTTGGAATATTTAAAGAAGCTCTATCGTCTCATGTGGTGGAATCAAGGACCTATTTTTTTCAGAAGTTCTTCTACTGCTTTTGGTGGGGTTTGCGCAATATCAGTTCTCTTGGCCAAAACCTCCAGACAAGCACTTTTATTTGGGAGATATATTTTGCAATTTTCATCTCCATCTTCGGTTTGGTTTTGTTCTCGGTAATTATTGGATACATGCAGAGATATCTGCAATCTAGAATTGTGAGAGAAGAAGAGATAATGGTCAAAACCCAGGACACAGAGCGCTGGATGTCTCACAGAAAGCTTCCTGAATACTTGAGGGAAAGAATTAGAAGGTATGAGCATTACAAATGGCAAAAAGAAAGGGGTGTTGATGAGGAAACTTTTATCCGCAACCTTCCCAAAGATCTCAGAAGGGATACAAAACGTCATCTTTGCTTGGCTTTACTTAACAAGGTCCCATTGTTTGAAAAAATGGATGACCAATTGTTGGATGCAATGTCGGCTAGGCTGAAGCCAGTGCTTTATACAGAGAATAGCTGCATTTTTCGTGAAGGAGAACTAGTTGATGAAATGCTTTTCATCATGCAAGGAAAGCTTAGAACTGTGACCACAAATGGTGGAAGAACTGGTTTCCTCAACTCCCTTGAACTCAATGCAGGCGACTTCTGCGGAGAAGAGCTTCTACCATGGGCCTTGGACCCTAACTCCACCTCAAATCTTCCCATTTCAACCAGAACAGTAGAAACTATATCAGAAGTTGAGGCTTTTGCTCTCATGCCTGAAGATTTGAAGTTCTATTCCCTACTATGGAGAACATGGGGTGCCTGTTTCATACAAGCAGCTTGGCGTTGCTACACCAAAAAGAAGATTGATAGATCATTACGTGAAGCAGAAGATAGGCTAAAAGATGCTTTGGGAAATGAAGATGGGCACATGCAAAGTCTTGGTGCCATAGTATTTGCATCAAGGTTTGCTGCTAATGCATTACCAAACTTGCAACAGAATGGTGAGTGCAGCAACAGATTCCGACAGAGAATGCTACCTTTGCTGCCTCAGAAGCCGGCTGAGCCTGATTTCTCTGCTTAA 1824 0.4057 MLASRNKIFDPQDPAFRRWSGIFVFTCLVAISVDLLFFYIPEINEHEKCLDLDGGLKITVCVLRSIFDLIYVLHIIFQLRAGFIASSSGYFVIDILSIIPLPQVFVLGIIPILKSSVPFGMIDFLKIIIFVQYLPRVIRIYPKWKQMPRKSAILTGSRTAWSAAASNLLFYILASHIVGSSYYLFSVESELRCWRQELKNSKLYNVVLSHDVSFSCGQHKQTIPSLLNTSCFFIDANELKDPTAFDFGIFKEALSSHVVESRTYFFQKFFYCFWWGLRNISSLGQNLQTSTFIWEIYFAIFISIFGLVLFSVIIGYMQRYLQSRIVREEEIMVKTQDTERWMSHRKLPEYLRERIRRYEHYKWQKERGVDEETFIRNLPKDLRRDTKRHLCLALLNKVPLFEKMDDQLLDAMSARLKPVLYTENSCIFREGELVDEMLFIMQGKLRTVTTNGGRTGFLNSLELNAGDFCGEELLPWALDPNSTSNLPISTRTVETISEVEAFALMPEDLKFYSLLWRTWGACFIQAAWRCYTKKKIDRSLREAEDRLKDALGNEDGHMQSLGAIVFASRFAANALPNLQQNGECSNRFRQRMLPLLPQKPAEPDFSA 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00573 607 SUPERFAMILY cAMP-binding domain-like 328 510 IPR018490 -
Bach6g00573 607 CDD CAP_ED 400 504 IPR000595 -
Bach6g00573 607 Gene3D Jelly Rolls 398 514 IPR014710 -
Bach6g00573 607 SMART cnmp_10 400 523 IPR000595 -
Bach6g00573 607 Pfam Ion transport protein 19 324 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bach6g00573 607 SUPERFAMILY Voltage-gated potassium channels 10 327 - -
Bach6g00573 607 FunFam Cyclic nucleotide-gated ion channel 1 398 515 - -
Bach6g00573 607 Gene3D - 20 324 - -
Bach6g00573 607 Coils Coil 533 553 - -
Bach6g00573 607 Gene3D Helix hairpin bin 327 391 - -
Bach6g00573 607 ProSiteProfiles cAMP/cGMP binding motif profile. 400 484 IPR000595 -
Bach6g00573 607 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 4 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00573 Bach-Chr6 4212798 4216349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00573 2 607 Ion Channels AT5G53130 56.462 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00573 K05391 - qsa:O6P43_017768 787.334