Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00570 ATGGCCATCTTGAAGGTCCTCTTCTTTTGCTTCTTCATCTTTCCAGCCATATATGCCTCAGAGGATTGCCAATTTTCCAGGTGTAGCAACGATAGCATCGTTATCCGATTCCCCTTCCAACTAGAAGGTGAGCAGCAACATCGGAATTGTGGTTACCCTGGTTTCAACTTATTCTGCACTAATGACAACAGCAGAACAATTCTAAAACTTCCTTACTCTGGAGATTTCTATGTGAGCAACATCAACTATTTGTCACAGCAGATACAAGTCTATGATCCTGACGGTTGCCTTCCCAAACGTCTTCTAAGCCTCAATCTTTCTGGTTCTCCTTTTGCTATTACTTTCCGTAGAAACTATACCTTCATAAGCTGCCCATATAAAGCCTCAGGACCAGACCTTACTCCCATTAATTGTCTTAGTAATTCTACCAATTCCGTATTGGCTGTCCCTACTGCGCGGCTGGAGGATTCGTTGCCCGAATCTTGTTTCGTTATTAGTAGACTGTCAGTTCCACTTGCAAGGCCAGGACAGTATGATTATACTTTGAGAGATGATCTCGATCAAGATCTTGGGTTAACATGGTACGAGCCTGATTGCAGAATCTGTGAAACGAACGGTGTGTGTGGGCTTGATGGTAGAAATGATCGTATTCGTTGTTTCTCTGATTCCAGAACAGGTAATTCCGGAGGCGGTCTTCGAGTTTTTAGAATCATCATCTTAACCATATCCGCACCTGCAGTAATTTGTGTTATTGCATTGGCATGCCTTGCATGCGTCATGGATAGAAGAGGCAGGGGAGTCGGCGCTGCCGGTGGCCAGAGGTCAGCTCCAACCGCGGTACAACCACAAGCTGCCATTACCACGGTGGGTCTAGACGAGTCTACAATTGAATCCTATGAGAAGCTAGTATTAGGCGAGAGCCGGCGACTGCCGGGACCCAATGACGGCAGTTGCTCGATATGCCTGTCAGAGTACAATACCGAAGAGACAATCAAATTGATTCCAGAATGCAAACATTGTTTTCATGCTGATTGCATAGACGAATGGCTTCGCATGAACAGTTCATGTCCAGTTTGCCGTAACACTCCTTCCCCTTCCCCTTCCCCTTCTCCTCTTCATCTTACAGCTTCCAGTGATGCTTGA 1143 0.4584 MAILKVLFFCFFIFPAIYASEDCQFSRCSNDSIVIRFPFQLEGEQQHRNCGYPGFNLFCTNDNSRTILKLPYSGDFYVSNINYLSQQIQVYDPDGCLPKRLLSLNLSGSPFAITFRRNYTFISCPYKASGPDLTPINCLSNSTNSVLAVPTARLEDSLPESCFVISRLSVPLARPGQYDYTLRDDLDQDLGLTWYEPDCRICETNGVCGLDGRNDRIRCFSDSRTGNSGGGLRVFRIIILTISAPAVICVIALACLACVMDRRGRGVGAAGGQRSAPTAVQPQAAITTVGLDESTIESYEKLVLGESRRLPGPNDGSCSICLSEYNTEETIKLIPECKHCFHADCIDEWLRMNSSCPVCRNTPSPSPSPSPLHLTASSDA 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00570 380 CDD RING-H2_EL5-like 317 360 - -
Bach6g00570 380 Pfam Wall-associated receptor kinase galacturonan-binding 23 92 IPR025287 GO:0030247
Bach6g00570 380 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 3 364 IPR046948 -
Bach6g00570 380 SUPERFAMILY RING/U-box 310 366 - -
Bach6g00570 380 ProSiteProfiles Zinc finger RING-type profile. 318 360 IPR001841 -
Bach6g00570 380 MobiDBLite consensus disorder prediction 360 380 - -
Bach6g00570 380 Pfam Ring finger domain 317 360 IPR001841 -
Bach6g00570 380 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 279 365 IPR013083 -
Bach6g00570 380 SMART ring_2 318 359 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00570 Bach-Chr6 4198057 4199998 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00570 28 365 C3H Transcription Factor Family AT2G25410 43.605 2.95e-89 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00570 - - aprc:113851081 450.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach6g00570 6 4198057 4199998 Bach6g00570 6 4198057 4199998 ECH