Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00568 ATGATAATTAAGCGAACAATGAAAATTGAAATGCCGAACCTGAAGCGTTGTAAAATGGAGGAGGTGGATTCCGACGAGTATGAGTTGGATGCGGTTCCGAAGAAACGGAGGGTGAACGGGTTTTACTCTCTTGGTATGCCTGGTGAGGCTGAAGATTTCAGCAGTGGTTCAGGGTCTTGGTGCAGCGAAGGGTCTTACTGGGGTAGTGGTGAGGTCCAGTCGAAATCAAATTCAATGCGATTGAATGGTAGAACAGCGCTACAACGAGGCTCTAAAGGGTTTCGGCCTCCATTGTTAAGGTCCTCTCGAGGTCGTCCTCAGATACTTCCGTCGAGGTTCAATGACTCAGTCATTGATACATGGAAGAGTGAAGATATTAAAGTGGAGGACACAGACTCCAGCTTCGAAGATGATAATATTTTTGTAGATGATAGAGCAGGAATTAGTGGATTGGGATTTGTGAAAAAGGAACAGAGAGATAACTATAGCTTCAAAGGTTCGAAGTGTTACCCATATCTAGAAATGGACGAGGAACAAGAAATGGATGGCTTCGGTTTCAACGATTTTGATAGCAGAGAACATGCAAATTCGTTTAGTAACATTAGGAGCACAGTGGGCGGTGGTCGTTCTCAGTTAGTAAAAACTGAGAGTTATGCTTCTGGACTTACCTTAGAGAATGGAGATCGAAAGCATAATAAAAGTGCTGAGAAGAGGAAGGACATATACAAACCAGAGGATTTTGCTCTGGGTGATATAGTTTGGGCCAAATGTGGGAAGAGATATCCGGCTTGGCCTGCTATAGTGATCGATCCCATCTTGCAAGCTCCTAAAGCAGTCCTGAGCTGTTGCATTCCTGGTGCAATTTGCGTGATGTTTTTTGGGTATTCAAAAAATGGAAAGCAAAGGGACTACGCATGGGTGAAGCAAGGAATGATATTCCCCTTCATGGAATTCATGGACAGATTCCAGGGGCAGACCCGGTTGTACAAGAGCAAGCCAAGTGACTTTCAGATGGCACTGGAGGAGGCATTGTTGGCAGAAGATGGTTTTTTGGACTCAAACATGGGAACCGAGCAAATTACTGATATTGAAGCTCATCCCAGTGGATATATAGAGGCTTCGAATTCATATGCTGTTCCCGAATATTACTCCCAGGATCAGGTTAATTATCATAGGGATTCAAGACCTTGTGCAGGCTGTGGTCTAATTTTGCCTTGCAAAACCATGAAGAAGATTAAGGATTCAAGCTGTGCAACTCAACTTTATTGTAAACATTGTGCAAAGTTACGAAAATCAAAACAATATTGTGGCATTTGCAATAAAATTTGGCACCATTCAGATGGTGGGAATTGGGTATGTTGTGATGGTTGTAATGTTTGGGTGCATGCGGAGTGTGATAAAATCTCCAGTAAATTGTTCAAGGATCTGGAAAATAAAGATTACTATTGTCCATGTTGCAAGCCAAAATTAAGCTCTAAATTGCAAGCCTCACAATCATACAAGTCAAAATTCAAATCAATAGAGGATAACCAAAGAACTGAGATACCTGACAAGATAACAGTGGTATGCAATGGCATGGAAGGATTTTACATTCCAAAACTTCATTTGGTTTTGTGCAAGTGTGGTTCATGTGGGTCAAGGAAGCAGACACTGAGTGAATGGGAAAGGCATACAGGCTGCAGAGCTAAAAAATGGAAATATAGTGTGAAAGTAAAGAGTACAATGCTACCGTTGGAAAGATGGATCTCAGAGCACAATACACAAGGTGGAGTTTCCATGCAATTAGATCAGCAGCAGGTCCTTGCCTTTCTGCAAGAGAAGTATGAGCCGGTTTATGCAAAATGGACAACAGAAAGATGTGCTGTTTGTAGATGGGTTGAAGATTGGGATGATAACAAAATTATTATCTGCAACAGGTGCCAAATAGCAGTCCACCAAGAATGCTATGGGGCAAAGGATGTTCAGGATTTTACTTCTTGGGTTTGTAGAGTATGTGAAACTCCTGATGTTGAGAGAGAATGTTGCCTCTGCCCTGTAAAAGGTGGTGCACTAAAGCCAACTGATGTTGAGATGCTGTGGGTTCACGTCACGTGTGCTTGGTTCCGGCCTGAAGTTGGTTTCGCAAACCATGAAACGATGGAACCTGCCTTTGGAATCCTGAAAATTCCTCCTACTTCCTTTTTGAAGAGTTGTGTTATCTGTAAACAAGCTCATGGTTCCTGCACCAGTTGTTGCAAGTGTGCAACTTATTTTCATGTGATGTGCGCATCAAGAGCTGGGTACAGCATGGAATTGCATTCCATGGAGAAGAATGGGAGTCATATAGTAAAGAAGCTCATATATTGTGCAGTTCACAGGGTCCCAAACCCAGATTCAGTACTGGTTGTACATACTCCCCTTGGGGTTTTCTCTCCCAGAACTTCACTGCAAAGTCAGAAGGGATGCTTCAGGGGTTCAAGGTTGGTTTCAGCAAAGAACATAGAACTTCTTGAATCTTCAACCTCTGAGAAGAATGAGTTTGAGCCACTCTCTGCCGCAAGGTGTCGTTTATACACAAGAGCTGTCAAAAAGAAGGCTGATGTGCCCATAATCCATTTAGTGAGTGGACCAAGCCATCATTCTTTAAGTGCAACGACTCAATTGAACAGCTATGAGGATGCTGATAATTCTAAAATATTTACTTCATTCAAAGAAAGACTTCACCATTTACAGAAAACTGAAAATCATCGAGTTTGCTTTGGAAAATCGGGAATACATGGATGGGGCCTCTTTGCATGTAGAAATATACAAGAAGGAGAGATGGTTACTGAGTATCGTGGTGAACAGGTGAGGCGTAGTGTTGCTGATATGAGGGAGGCAAAGTACCGTTCAGAAGGCAAAGATTGTTACCTCTTCAAGATAAGTGAAGAAGTGGTAATTGACGCAACACACAAGGGCAACATAGCACGCTTGATAAACCATTCTTGCATGCCGAACTGTTACGCAAGAATTATGAGTATGGGTGATAATGAGAGCCGGATTGTTCTAATTGCCAAGACCAATGTTTCTGCTGGTGAAGAATTAACGTATGATTACTTGTTTGATCCAGACGAGCGGGATGAACTGAAAGTTCCCTGCCTTTGTAAAGCTCCCAATTGTAGGAAATTTATGAACTAGCTTTCATTCTTTCAGGTTCGAGGCGCAATTGCAAAGTTCCCTGCCTTATCCCAGAGGAATGGATACATTTATTTAGCGAGCGTGTAATTTTTTTTT 3252 0.4228 MIIKRTMKIEMPNLKRCKMEEVDSDEYELDAVPKKRRVNGFYSLGMPGEAEDFSSGSGSWCSEGSYWGSGEVQSKSNSMRLNGRTALQRGSKGFRPPLLRSSRGRPQILPSRFNDSVIDTWKSEDIKVEDTDSSFEDDNIFVDDRAGISGLGFVKKEQRDNYSFKGSKCYPYLEMDEEQEMDGFGFNDFDSREHANSFSNIRSTVGGGRSQLVKTESYASGLTLENGDRKHNKSAEKRKDIYKPEDFALGDIVWAKCGKRYPAWPAIVIDPILQAPKAVLSCCIPGAICVMFFGYSKNGKQRDYAWVKQGMIFPFMEFMDRFQGQTRLYKSKPSDFQMALEEALLAEDGFLDSNMGTEQITDIEAHPSGYIEASNSYAVPEYYSQDQVNYHRDSRPCAGCGLILPCKTMKKIKDSSCATQLYCKHCAKLRKSKQYCGICNKIWHHSDGGNWVCCDGCNVWVHAECDKISSKLFKDLENKDYYCPCCKPKLSSKLQASQSYKSKFKSIEDNQRTEIPDKITVVCNGMEGFYIPKLHLVLCKCGSCGSRKQTLSEWERHTGCRAKKWKYSVKVKSTMLPLERWISEHNTQGGVSMQLDQQQVLAFLQEKYEPVYAKWTTERCAVCRWVEDWDDNKIIICNRCQIAVHQECYGAKDVQDFTSWVCRVCETPDVERECCLCPVKGGALKPTDVEMLWVHVTCAWFRPEVGFANHETMEPAFGILKIPPTSFLKSCVICKQAHGSCTSCCKCATYFHVMCASRAGYSMELHSMEKNGSHIVKKLIYCAVHRVPNPDSVLVVHTPLGVFSPRTSLQSQKGCFRGSRLVSAKNIELLESSTSEKNEFEPLSAARCRLYTRAVKKKADVPIIHLVSGPSHHSLSATTQLNSYEDADNSKIFTSFKERLHHLQKTENHRVCFGKSGIHGWGLFACRNIQEGEMVTEYRGEQVRRSVADMREAKYRSEGKDCYLFKISEEVVIDATHKGNIARLINHSCMPNCYARIMSMGDNESRIVLIAKTNVSAGEELTYDYLFDPDERDELKVPCLCKAPNCRKFMN 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00568 1051 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 614 668 IPR013083 -
Bach6g00568 1051 SUPERFAMILY FYVE/PHD zinc finger 618 682 IPR011011 -
Bach6g00568 1051 CDD SET_SETD1-like 898 1047 - -
Bach6g00568 1051 SMART PostSET_3 1035 1051 IPR003616 -
Bach6g00568 1051 CDD PWWP_AtATX3-like 250 350 - -
Bach6g00568 1051 CDD PHD_ATX3_4_5_like 619 665 IPR042011 -
Bach6g00568 1051 ProSiteProfiles Zinc finger PHD-type profile. 617 668 IPR019787 -
Bach6g00568 1051 Pfam PHD-finger 435 489 IPR019787 -
Bach6g00568 1051 Pfam PHD-finger 632 666 - -
Bach6g00568 1051 Gene3D SET domain 838 1051 IPR046341 -
Bach6g00568 1051 FunFam Histone-lysine N-methyltransferase 669 788 - -
Bach6g00568 1051 FunFam Histone-lysine N-methyltransferase 884 1051 - -
Bach6g00568 1051 SUPERFAMILY FYVE/PHD zinc finger 433 494 IPR011011 -
Bach6g00568 1051 ProSiteProfiles Post-SET domain profile. 1035 1051 IPR003616 -
Bach6g00568 1051 ProSiteProfiles Extended PHD (ePHD) domain profile. 671 786 IPR034732 -
Bach6g00568 1051 PANTHER PHD FINGER PROTEINS 48 486 - -
Bach6g00568 1051 Pfam PWWP domain 250 345 IPR000313 -
Bach6g00568 1051 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 1051 IPR025780 -
Bach6g00568 1051 ProSiteProfiles PWWP domain profile. 249 318 IPR000313 -
Bach6g00568 1051 Pfam SET domain 920 1025 IPR001214 GO:0005515
Bach6g00568 1051 ProSiteProfiles SET domain profile. 909 1026 IPR001214 GO:0005515
Bach6g00568 1051 SMART set_7 909 1032 IPR001214 GO:0005515
Bach6g00568 1051 Gene3D - 240 348 - -
Bach6g00568 1051 SMART PHD_3 435 487 IPR001965 -
Bach6g00568 1051 SMART PHD_3 730 786 IPR001965 -
Bach6g00568 1051 SMART PHD_3 619 666 IPR001965 -
Bach6g00568 1051 SMART PWWP_4 247 316 IPR000313 -
Bach6g00568 1051 ProSiteProfiles Zinc finger PHD-type profile. 433 489 IPR019787 -
Bach6g00568 1051 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 427 490 IPR013083 -
Bach6g00568 1051 CDD PHD_TCF19_like 436 486 - -
Bach6g00568 1051 SUPERFAMILY Tudor/PWWP/MBT 240 350 - -
Bach6g00568 1051 Pfam PHD-zinc-finger like domain 673 785 - -
Bach6g00568 1051 ProSitePatterns Zinc finger PHD-type signature. 620 665 IPR019786 -
Bach6g00568 1051 SUPERFAMILY SET domain 902 1048 IPR046341 -
Bach6g00568 1051 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 669 787 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00568 Bach-Chr6 4185052 4192576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00568 391 460 EF-hand Containing Proteins AT5G28340 57.143 1.06e-20 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bach6g00568 zf-HC5HC2H_2 4.8e-28 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00568 - - gmx:100793624 1574.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach6g00568 6 4185052 4192576 Bach6g00568 6 4185052 4192576 ECH