Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00555 ATGGAATCGGAAACTCGACGAAGAATCGAGGACACGGTGACTGATATACTGAAGAATTCCAACATTGAGGAGATGACTGAGTTCAAGGTCCGAGTGACGGCCTCGGAGCGGCTCGGAATCGACCTTTCTGATTCGCAGTACAAGCAGTTTGTGAGGAAAGTCGTGGAATCTTATCTGCTTGCTATCGCAGCAGAAGAAGAGAATCAAAGCGAAAACCCGTCTCAATTGAATGCTCCAGAAGATGTTAGAGAGCTTATGCAGGAAGTGCAGGAGGAGAAACCGAAGAGGGAGGTTAAGGATGACACAGACCGCATTATTTGCCAGCTGTCAAACAAGAGGAATGTTGTGATTCAAGATTTCAAAGGGAAAACAATGGTGACAATTAGAGAATACTATCAAAAAGATGGAAAACAGCTTCCTGGTGCTAAAGGGATAAGCTTGCCAGCTGAACAGTGGTCAATCCTCAAGAAGAATGTCCCTGCTATAGAGGAAGCAATCAAAAAAATGGAAGCAAAGACAAGTTCTGAGCTTAACGATAAGCAAAATGAAGAAGTTTCTAATTCAGTTGTTGACACTTTCCCTCCTGAGCTTGTTCCTGTGGATATCAGTCGCTTTAACGGGAAGAATTACCATCTCTGGGCTCAGCAGATAGGGTTACTCTTAAAACAATTGAAGATTGCTTATGTACTCACTGAACCATGCCCGAGTGCTAGACCTGGACAAGATGCAAATGCTGAAGAAAAGAGATGGGCAGATGATGATTTCCAGTGCCGTCGCAACATCTTACTCTATTTGTCTGACCATCTTTTAGATCAGTATGCCAACAGGAAAATGAGTGCCAAAGAACTGTGGGAAGAGTTAAAACTAACCTATCTGTATGAGGAATTTGGAACAAAGAGATCTCAAGTTAAAAAGTACATTGAATATCAGATGGTTGAGGAAAACTCAATTCTTGAGCAAGTCCAAGAATTTAATAACATTGCAGACTCTATTGTTGCTGCTGGAATTTTAATTGATGAGAACTTTCATGTCAGTGTCATCATTTCTAAGCTTCCTCCATCTTGGAAGAACGTCTGCAACAAGTTAGCGTGCGAGGAGTATTTACCTTTCTGGAAATTAATGAATCGTTTAAGGACAGAAGAAGAATCTCGCAATCAAATCAAGGTGAGTGAACCTTCTAATAATCCAAGCTTTCATCTGGGCAAAAGACCTAGGGGAACAGATAATATGCCACCAGGTATGCATAGGAATAAGCCAGATATGAATAGCAAGAAGATTGCCTGTTATTACTGTGGCAAGAAAGGTCATCTTTCAAAAAATTGCTGGTGGAAATCTGACAAGCAAGGTGGTGAAAGGAGAGTAGAGGAGAATGACTCTACACCCGCTGTTGCAGAGGCGAACATGCCTAGGACTATGGAGTAA 1422 0.4184 MESETRRRIEDTVTDILKNSNIEEMTEFKVRVTASERLGIDLSDSQYKQFVRKVVESYLLAIAAEEENQSENPSQLNAPEDVRELMQEVQEEKPKREVKDDTDRIICQLSNKRNVVIQDFKGKTMVTIREYYQKDGKQLPGAKGISLPAEQWSILKKNVPAIEEAIKKMEAKTSSELNDKQNEEVSNSVVDTFPPELVPVDISRFNGKNYHLWAQQIGLLLKQLKIAYVLTEPCPSARPGQDANAEEKRWADDDFQCRRNILLYLSDHLLDQYANRKMSAKELWEELKLTYLYEEFGTKRSQVKKYIEYQMVEENSILEQVQEFNNIADSIVAAGILIDENFHVSVIISKLPPSWKNVCNKLACEEYLPFWKLMNRLRTEEESRNQIKVSEPSNNPSFHLGKRPRGTDNMPPGMHRNKPDMNSKKIACYYCGKKGHLSKNCWWKSDKQGGERRVEENDSTPAVAEANMPRTME 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00555 473 SUPERFAMILY Retrovirus zinc finger-like domains 413 448 IPR036875 GO:0003676|GO:0008270
Bach6g00555 473 Gene3D Transcriptional Coactivator Pc4; Chain A 96 174 IPR009044 GO:0003677|GO:0006355
Bach6g00555 473 Pfam DEK C terminal domain 5 59 IPR014876 -
Bach6g00555 473 ProSiteProfiles Zinc finger CCHC-type profile. 428 441 IPR001878 GO:0003676|GO:0008270
Bach6g00555 473 SMART c2hcfinal6 427 443 IPR001878 GO:0003676|GO:0008270
Bach6g00555 473 MobiDBLite consensus disorder prediction 384 418 - -
Bach6g00555 473 Pfam Transcriptional Coactivator p15 (PC4) 107 158 IPR003173 GO:0003677|GO:0006355
Bach6g00555 473 Gene3D - 403 457 - -
Bach6g00555 473 SUPERFAMILY ssDNA-binding transcriptional regulator domain 106 168 IPR009044 GO:0003677|GO:0006355
Bach6g00555 473 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 3 60 IPR014876 -
Bach6g00555 473 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 3 171 IPR045125 GO:0003713|GO:0060261
Bach6g00555 473 Pfam Zinc knuckle 427 441 IPR001878 GO:0003676|GO:0008270
Bach6g00555 473 Pfam gag-polypeptide of LTR copia-type 250 386 - -
Bach6g00555 473 MobiDBLite consensus disorder prediction 446 473 - -
Bach6g00555 473 FunFam RNA polymerase II transcriptional coactivator KELP 98 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00555 Bach-Chr6 4098580 4101626 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Bach6g00555 Retrotran_gag_2 9.3e-18 CL0523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00555 - - qsa:O6P43_017796 577.015