Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00553 ATGGAGCAACCACCATACACTGAAGATGACCTAGCCGCCACGGCCTCCGCCGCAGAAAAACCTGACAACCCAGGTGGTGGCACGCGACACCCGGTATACCGCGGCGTCCGGAAGCGGCGGTGGGGTAAATGGGTGTCCGAAATTCGGGAGCCGCGCAAGAAATCCCGAATATGGCTCGGGTCTTTTCCGGTGCCGGAGATGGCAGCAAAGGCATACGACGTCGCAGCGTACTGCTTAAAGGGAAGAAAAGCGCAGCTTAATTTTCCTGATGAGGTCGAGGAGTTGCCGCTGCCGTCCACGTGTACATCCAGGGATATTCAGGCAGCGGCGGCGAAAGCAGCGCGTATGATAAAAACTTCGGCTTCAAAGAGCAGCATTACATCGTCGGACGGTGACGGAGATGGCGAGGGAGAAAGCCACGGTGATGATTTTTGGGGCGAGATTGAATTGCCGGAGCTGATAAATAATGGGTACTGTTGGAATTCTACATGTGCGTCTCCGTGGATTTCCCCAGGCGACATCACGGCGTGGTCGGAGGTGGAGCCTCCTCCGCAGGCACCATTCATGGCGTGTCTATAG 579 0.5648 MEQPPYTEDDLAATASAAEKPDNPGGGTRHPVYRGVRKRRWGKWVSEIREPRKKSRIWLGSFPVPEMAAKAYDVAAYCLKGRKAQLNFPDEVEELPLPSTCTSRDIQAAAAKAARMIKTSASKSSITSSDGDGDGEGESHGDDFWGEIELPELINNGYCWNSTCASPWISPGDITAWSEVEPPPQAPFMACL 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00553 192 SMART rav1_2 32 95 IPR001471 GO:0003700|GO:0006355
Bach6g00553 192 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 18 133 - -
Bach6g00553 192 CDD AP2 33 90 IPR001471 GO:0003700|GO:0006355
Bach6g00553 192 MobiDBLite consensus disorder prediction 1 32 - -
Bach6g00553 192 Pfam AP2 domain 31 81 IPR001471 GO:0003700|GO:0006355
Bach6g00553 192 PRINTS Ethylene responsive element binding protein signature 33 44 IPR001471 GO:0003700|GO:0006355
Bach6g00553 192 PRINTS Ethylene responsive element binding protein signature 71 91 IPR001471 GO:0003700|GO:0006355
Bach6g00553 192 Gene3D AP2/ERF domain 32 90 IPR036955 GO:0003700|GO:0006355
Bach6g00553 192 FunFam Ethylene-responsive transcription factor 2 31 90 - -
Bach6g00553 192 SUPERFAMILY DNA-binding domain 32 91 IPR016177 GO:0003677
Bach6g00553 192 ProSiteProfiles AP2/ERF domain profile. 32 89 IPR001471 GO:0003700|GO:0006355
Bach6g00553 192 MobiDBLite consensus disorder prediction 120 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00553 Bach-Chr6 4074281 4074859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00553 1 192 AP2-EREBP Transcription Factor Family AT1G01250 57.635 1.63e-63 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach6g00553 AP2 1.9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00553 K09286 - qsa:O6P43_017799 258.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach6g00553 6 4074281 4074859 Bach6g00553 6 4074281 4074859 ECH