Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00551 ATGGCACAACCGGTTTGTAATTTGAGGGGCCCGGCGAGTTCCCTTGCTGAAACAGGGTCTGGAAAAGATTATCTGTATACAGAGCTATGGAAGCTCTGTGCAGGCCCTTTGGTGGATGTACCCCGGGCGGGGGAGAGAGCTTTCTATTTCCCTCAGGGTCACATGGAACAATTGCAAGCATCGACGAATCAGGATTTGAACCTGAACCAGCAATTGCCCCATTTTAATCTTCCTCCAAAGATACTCTGCCGTGTTATTGACACTTCACTGTTGGCGGAACAAGACACTGATGAAGTTTATGCTCGAATAACTTTGCTGCCGGAAACAGATCAAACTGTGCCGTCCATACCTGATGCATGTCCGCCTGAGACTCAAAAACAAGCAATTTATTCATTTTGCAAAATATTGACAGCCTCAGATACCAGCACACATGGAGGATTTTCAGTTCTGCGCAAGCATGCTACCGAGTGCCTGCCTCAATTGGACATGAGCCAAGCGACCCCAACTCAGGAATTGGCAGCGAAGGATCTTCATGGGTTTGAGTGGAAGTTTAAGCATATATTCAGAGGTCAACCGAAGAGGCACTTGCTCACTACTGGCTGGAGCACATTTGTCACTTCAAAAAGATTAGTTGCTGGTGATGCTTTTGTGTTTCTAAGGGGAGAGAATGGGGAGCTGAGAGTTGGTGTCAGACGTCTTGCTCGGCAGCAGATCCCAATGCCTTCATCTGTAATATCAAGCCAAAGCATGCATCTTGGAGTGCTTGCCACTGCTTCGCATGCTGTTAAGACCAGCACCATGTTTGTGGTTTTATACAAACCAAGGACTAGCCAGTTCATCATTGGCTTGAACAAATATCTTGAGGCTATGAACAACAAATTTTCTGTTGGTATGCGATTCAAGATGAGATTTGAAGGGGATGATTCACCCGAGAGAAGGTTTTCGGGTACTATTATTGGGGGTGGAGATATATCTCCAGAATGGTCAGACTCTGAGTGGCGGTCACTGCAGGTTCAATGGGATGAACCAGCGACAATTCAAAGACCAGAGAGGGTTTCTCCTTGGGAGATAGAACCTTTTGTAGCTTCTGCTGCTTTAAATCTCACGCAGCCAGCTGTGAAGAGCAAAAGGTCCCGTCCTCCTGATGTTCCATCTTCCGCTGCTTCAGCTTTCTGGTATCATGGGTCATCCCAGCCTCACGAGCTCACACAATCAGGTAGTGCTGCAGATGTACAAAGCAAAGAAAACCAGGTTGTATGGCCTATGATGCAGAAAGAAACAGATTGCAATCCAATGAATGCTAACAACAGCTTTAGCAGCTCTAGAGTCCGGGTTGAGGGAATGTGGTCGTCTTCTCCACATTTGAATGTCGCTTCCAACTTTTTCCCTGACCCCAGGAACAATAAAGCTGTTGTGGGACAATCCTCTATCACTGGTTATGCCCCTGTTTCTTCTAGGACATGTGATAACCTTGTGTATGACCAGGTGGAAAATGGGAAAAAATCTGACCATTGCACTGGCATCATGTTATTTGGAGTTGATCTGAAAGGCAACTCTAACACTGTTTCTCCTCTGGAGAAAGAAATGGGACGTCCAACTATGATTCCTAGTGGTCCCAAAGAATCCATTCCTGTTGCTGCATGTGAAACTGAGAGGGGTCAAAAGCCTAATTATTCAATGATCAAGACTGAAACACCTTATGAGAAGCAGAGCAAGCAGGTGTCTGCACCATCTGCGAGGACTCGCACTAAGGTGCAAATGCAAGGTGTTGCTGTTGGTCGCGCTGTTGACTTGACCACATTGAAGGGATACGATGAACTCATAGATGAGCTAGAAAATTTGTTTGATCTTAAAGGAGAACTTCGTTCAAGAGACAAATGGGCAGTCACTTTTACCGATGACGAAAATGAATTGATGCTCGTTGGCGATGATTCATGGCCGGTGTTCTGCAATGTGGTGAAGAGGATTTTCATCATAACGAGGGAGGAATTAAAGAAGAAAAATTCAAAGCTGAAGCTTTTGGCATCTTCATCCGAGGGTGAAGAGACCCTGCTGAGTATGGATTCACAGATTAGGGATGCGTAAAAGTGGATAAACTAGTTTTCTTTAGAGAGTTGAAGTTTTTTTCAATGTCAGTTTGGGTTGCTTAAGTTGATGAACTTCGCAAGAACGTCATAGTATTAGATGAGTTCTTAAGTGGATAACCATTATATGAAAATAATAGGAACTTCCATTTGAATTCAAG 2245 0.4477 MAQPVCNLRGPASSLAETGSGKDYLYTELWKLCAGPLVDVPRAGERAFYFPQGHMEQLQASTNQDLNLNQQLPHFNLPPKILCRVIDTSLLAEQDTDEVYARITLLPETDQTVPSIPDACPPETQKQAIYSFCKILTASDTSTHGGFSVLRKHATECLPQLDMSQATPTQELAAKDLHGFEWKFKHIFRGQPKRHLLTTGWSTFVTSKRLVAGDAFVFLRGENGELRVGVRRLARQQIPMPSSVISSQSMHLGVLATASHAVKTSTMFVVLYKPRTSQFIIGLNKYLEAMNNKFSVGMRFKMRFEGDDSPERRFSGTIIGGGDISPEWSDSEWRSLQVQWDEPATIQRPERVSPWEIEPFVASAALNLTQPAVKSKRSRPPDVPSSAASAFWYHGSSQPHELTQSGSAADVQSKENQVVWPMMQKETDCNPMNANNSFSSSRVRVEGMWSSSPHLNVASNFFPDPRNNKAVVGQSSITGYAPVSSRTCDNLVYDQVENGKKSDHCTGIMLFGVDLKGNSNTVSPLEKEMGRPTMIPSGPKESIPVAACETERGQKPNYSMIKTETPYEKQSKQVSAPSARTRTKVQMQGVAVGRAVDLTTLKGYDELIDELENLFDLKGELRSRDKWAVTFTDDENELMLVGDDSWPVFCNVVKRIFIITREELKKKNSKLKLLASSSEGEETLLSMDSQIRDA 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00551 694 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 24 666 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bach6g00551 694 FunFam Auxin response factor 293 364 - -
Bach6g00551 694 Coils Coil 604 624 - -
Bach6g00551 694 Coils Coil 661 681 - -
Bach6g00551 694 SMART B3_2 132 234 IPR003340 GO:0003677
Bach6g00551 694 Gene3D - 129 233 IPR015300 -
Bach6g00551 694 Pfam Auxin response factor 258 337 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bach6g00551 694 FunFam Auxin response factor 130 234 - -
Bach6g00551 694 SUPERFAMILY CAD & PB1 domains 579 656 - -
Bach6g00551 694 Pfam B3 DNA binding domain 132 232 IPR003340 GO:0003677
Bach6g00551 694 SUPERFAMILY DNA-binding pseudobarrel domain 123 261 IPR015300 -
Bach6g00551 694 ProSiteProfiles PB1 domain profile. 580 663 IPR000270 GO:0005515
Bach6g00551 694 CDD B3_DNA 131 232 IPR003340 GO:0003677
Bach6g00551 694 ProSiteProfiles B3 DNA-binding domain profile. 132 234 IPR003340 GO:0003677
Bach6g00551 694 Pfam AUX/IAA family 569 616 IPR033389 -
Bach6g00551 694 Gene3D - 293 365 - -
Bach6g00551 694 Gene3D - 576 668 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00551 Bach-Chr6 4048065 4052088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00551 21 679 B3 DNA Binding Superfamily AT4G23980 56.573 0.0 686
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Bach6g00551 B3 7.9e-21 CL0405