Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00542 TCTTGCGCCACAGCAGCAGAGATGGGAAGAGCTCCTTGTTGTTCTAAAGTTGGGCTGCACAGAGGTCCATGGACTCCCAGAGAAGATGCATTGCTCACCAAGTATATACAAGCTCATGGCGAAGGCCAATGGAGATCTTTACCAAAGAGAGCCGGGCTTCTGAGATGTGGGAAGAGTTGTAGACTAAGATGGATGAACTATCTGAGACCAGACATAAAGAGAGGCAACATATCGGAGGAAGAGGATGACCTCATCATCCGAATGCATTCCCTTTTGGGAAACAGATGGTCCCTCATCGCAGGCCGGCTGCCGGGCCGTACAGATAACGAAATAAAGAACTATTGGAACACCCATCTCAGCAAAAGGCTGAGAAACCAGGGAGCCGACCCGAACACCCACAAAAAATTAACAGATCCTGCAGTGAAACCACAAGATCAAACACCAAAGAGGAAGAACAACAACAACAACGATGGCAGCAAGAAGAAGAAGCAGAAGCAGACCAAGAACGACAAGAGCAAACAAGCAGAAGCAGAGAAGACCATAGTTTATCTACCAAAACCCATTAGGGTAACAGCTTTTTCTTTGCCCAGAAGTAATAGCACTTTCACTTTAGATTCCAATAATTCAGCAAGTGGCTCCACGAGCCAAGAGAAGGAAGAAGAAGGTTTTCCAGGGAACTGTCAAGAGGATAACCATAATGTGCCGTGGAGATCAGAGTATCATAATGAGGGAGAAAATGACGGGCTTGGATTCTTTCACGGAGAACATCATCGTCATGATTTGGTCAATGGCTGCTCCGACGACATGGAATGCCAATCTGATTTCTCCACGCTGGAGAAGCTTTATGACGAGTACTTGCAACTGTTGAAGACAGACGAAAACAAAGATGAATTGGAATCCTTTGCTGAATCTTTGTTCGTTTAA 924 0.4567 MGRAPCCSKVGLHRGPWTPREDALLTKYIQAHGEGQWRSLPKRAGLLRCGKSCRLRWMNYLRPDIKRGNISEEEDDLIIRMHSLLGNRWSLIAGRLPGRTDNEIKNYWNTHLSKRLRNQGADPNTHKKLTDPAVKPQDQTPKRKNNNNNDGSKKKKQKQTKNDKSKQAEAEKTIVYLPKPIRVTAFSLPRSNSTFTLDSNNSASGSTSQEKEEEGFPGNCQEDNHNVPWRSEYHNEGENDGLGFFHGEHHRHDLVNGCSDDMECQSDFSTLEKLYDEYLQLLKTDENKDELESFAESLFV 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00542 300 FunFam MYB transcription factor 68 129 - -
Bach6g00542 300 FunFam Myb transcription factor 11 67 - -
Bach6g00542 300 CDD SANT 16 61 IPR001005 -
Bach6g00542 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bach6g00542 300 Gene3D - 71 116 - -
Bach6g00542 300 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bach6g00542 300 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bach6g00542 300 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Bach6g00542 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bach6g00542 300 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bach6g00542 300 Gene3D - 14 66 - -
Bach6g00542 300 MobiDBLite consensus disorder prediction 147 170 - -
Bach6g00542 300 SMART sant 13 63 IPR001005 -
Bach6g00542 300 SMART sant 66 114 IPR001005 -
Bach6g00542 300 MobiDBLite consensus disorder prediction 191 214 - -
Bach6g00542 300 CDD SANT 71 112 IPR001005 -
Bach6g00542 300 MobiDBLite consensus disorder prediction 191 232 - -
Bach6g00542 300 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bach6g00542 300 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 225 - -
Bach6g00542 300 MobiDBLite consensus disorder prediction 115 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00542 Bach-Chr6 3968704 3969817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00542 1 173 MYB Transcription Factor Family AT4G38620 57.062 5.57e-69 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach6g00542 Myb_DNA-binding 1.8e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00542 K09422 - gmx:778044 363.229