Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00541 ATGGAAGGGATAGCTCCCAATTCATGCACAAGGCCAGTGATTGAGAAGAGCGCAAGGCCACAGGAGCAATTGAATTGTCCAAGGTGCAATTCAACCAACACAAAGTTCTGTTACTACAACAATTACAGCCTCACGCAACCTAGATACTTCTGCAAGACTTGCAGAAGGTACTGGACTGAAGGAGGGTCTCTCAGAAATGTCCCAGTTGGAGGAGGTTCAAGAAAGAACAAGAAGGTTACTCCAACATCATCATCAGCAGCAGCAGCTTCATCAAAGGTTCCTGATCTTAACCCACCAAGCATCTCAACTATGTCTTCCCTAAATCCTAAAATGCATGGAGGGCAAGATCTTAATCTGGCTTTCCCAGCAATGGAGAAGTATCATGGTATGTCCCAGTATATTGAGATGCCAAAACTTGAAAATGGCGATTCTAGTCACCAAAGCCCTTCTTCTGCACCAACATCACTTTCAGCTCTAGAGCTACTAAGAAGTGGGATGGCTTCTAGGGGTTTGAATCCTTATGTTCCTTCAATGATGCCGAACTCAAACACCCTTTATCCATCTGGGTTTCCGATGCAAGAAATTAAACCTAACCTTGGTTTTTCAGTTGATCATGGGCTTGGAAACAGATCTGGGGTCCAAGAAAACAGTGGAAGACTTTTGTTCCCTTTTGGAGATATGAAGCAGCTTTCATCAGGTAATACTGATCAAGTGGAACAAAATAAAGAACAAGGAAATTCATCAACTGGGTATTGGACTGGGATGATCGGCGAAGGATCATGGTGA 786 0.4364 MEGIAPNSCTRPVIEKSARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKVTPTSSSAAAASSKVPDLNPPSISTMSSLNPKMHGGQDLNLAFPAMEKYHGMSQYIEMPKLENGDSSHQSPSSAPTSLSALELLRSGMASRGLNPYVPSMMPNSNTLYPSGFPMQEIKPNLGFSVDHGLGNRSGVQENSGRLLFPFGDMKQLSSGNTDQVEQNKEQGNSSTGYWTGMIGEGSW 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00541 261 MobiDBLite consensus disorder prediction 76 99 - -
Bach6g00541 261 MobiDBLite consensus disorder prediction 231 255 - -
Bach6g00541 261 MobiDBLite consensus disorder prediction 65 99 - -
Bach6g00541 261 Pfam Dof domain, zinc finger 22 78 IPR003851 GO:0003677|GO:0006355
Bach6g00541 261 ProSiteProfiles Zinc finger Dof-type profile. 24 78 IPR003851 GO:0003677|GO:0006355
Bach6g00541 261 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 17 165 IPR045174 GO:0003700|GO:0006355
Bach6g00541 261 MobiDBLite consensus disorder prediction 231 261 - -
Bach6g00541 261 ProSitePatterns Zinc finger Dof-type signature. 26 62 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00541 Bach-Chr6 3955265 3956050 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00541 16 261 C2C2-Dof Transcription Factor Family AT3G61850 51.103 9.12e-74 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bach6g00541 zf-Dof 2.8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00541 - - gmx:778110 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach6g00541 6 3955265 3956050 Bach6g00541 6 3955265 3956050 ECH