Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00529 TGCAGAAGCATTTCTCAATCAGAAATTGGGGGAAATTTCTGCAACTTTTATACTGATATAAGAAGTTGGTCTTACTACTTCATGGGAAAGAAGGGGTTTTACTTGGTAGCATAATTGTGTCACAAGATGATGGTAGCAGAAGCATTTGCCAGTGGCGTTAATGGTCCTACTACAGAAGCTATTTCTCAGATTGCAGACATTATTAGCGAGTTTGTACTCTATGCTGCTGATGTTCTTGTAAAGAAGGATAGTTTTAAGGAACTTGCAACTTATCTGCAGAGAATCGTACCTGTCTTGAATGAAGTGAGGGAGATAACTGTGAGTAATTCTAACATCTTTGATCATTCCATTGAGATTTTGAATCGTGAAATCAGAGATGCAAACCAACTGAGATTAGAATGCAGCAAGAAAAGCAAGGTATATCTCCTAATGAATTGTAGGACAATTGTTAAGCGTTTAAAGAATAACACAAGTGAGATCTGCCGGGCACTTGGTCTACTTCCTTTGGCCACATCATGTCTTTCTTCTGGAATAATTGAACAAATTGAAGGTCTGCGTGACAGTATGCAAAAAGCTGAGTTTAAGGCAGCCATAGCAGAAGAAGAGATATTGGAGAAAATCGAGTCAGGGATACAGGAAAAGAATGTTGATCGCTACTATGCCAATAATTTGTTGTTTCTAATTGCAGAGGCTGTAGGGATTACTAAAGAGAATTCTACAATGAAGAAGGAACTTGAAGAATTCAAAACTGAGATTGAAAATGCCCGCCTTAGAAAGGACCTTGCTGAAGCTATACAAATGGATCAGATTATTGCTTTGTTAGAAAGGGCTGACGCAGCCACGTCACCTAGAGAAAAGGAGCTCAAGTACTTTGCCAAACGAAAGTCTTTGGGTAATCAACCCTTGGAGTCACTTCAGTCATTCATATGCCCCATAACCAGGGATGTTATGGTGGACCCTGTGGAAACTTCATCAGGGCAGACATTTGAGAAAAGTGCTATAGAAAAGTGGTTTAGAGAAGGAAACGCAATGTGTCCTCTCACCATGACTCCTTTAGACACTTCAGTTTTGAGACCAAACAAAACCTTGAAACAGTCAATTGAAGAATGGAAGGATAGAAATACCATGATTACAATTGCTTCAATGAGAGAAAAACTCCAGTCCGGAGATGATGATGAAGTACAACAATGTCTAGCAACTCTACAGGATTTGTGTGAACAAAAGGACCAGCATAGGGAATGGGTGATACTGGAGAATTACATACCACTTCTTATCCAACTTCTTGGTGCCAAGAACCGAGAAGTAAAGAATAATGCTCTTGTCATCCTTTGTATGTTGGCGAAGGATAGTGATCATGCTAAGGAAAGAATTGCAAAAGTTGAAAATGCAATTGAATCTATTGTCCGTTCTCTTGGGCGTCGTGTATTGGAAAGGAAGCTGGCAGTGGCATTACTGCTGGAATTATCCAAATATGATTTGATTCAAGAATACATTGGAAAGGTTCAAGGTTGCATTTTATTATTGGTGACTATGTCTAGCAGTGATGACAGTCAAGCTGCCAGAGATGCCACAGAGCTATTGGATAATCTTTCATACTCTGATCAGAATGTTTTAAAGATGGCAAAGGCAAATTATTTCAAGCACTTGTTGCACCGTCTTTCGACTGGACCAGATGATGTGAAAAAAATTATGGCAACAACTCTAGCGGAAATGGAGTTAACTGACCACAATAAAGAGTCCTTGTTTGAAGGTGGTGTTCTGGATCCTCTTCTTAAATTAGTCACACATGTGGATATTCAGGTGAAAATAGTTGCCATAAAAGCTCTTCGGAACCTATCTAGTTTAAAGAAAAATGGAATACAGATGATTCAACAAGGTGCAGTACGCCCATTACTTGACCTTCTTTTCCATCATGGCATACCATCCTCAAGTTTACGAGAACATGTAGCAGCCATAATTATGCTACTTGCCGCATCAACCATATATCAAGACGGAGAGGCACCAGTTTCGTTGTTAGAATCTGATGAAGATGTTTTTAACCTCTTCTCTTTGGTTCGAATTCAAGTGCCTGATGTGCAGCAGAATATTTTACAGGCTTTTAATGCCTTGTGTCAGTCCCCTTCAGCTACATATATCATGGCGAAGCTAATAGAGTGCTCAGCTGTTCAAGAATTGGTCCAGTTGTGTGAGCATGAGAACCTAAATCTACGAGCAAGTGCGGTAAAACTGTTTTCTTGCTTGGTAGATAGCATTGATGAAGCCTCCATCCTGGAAAATATTACTCAGAAAAGCATTGAGACTTTACTCAAGATCCTGAAAACTTCTTCGGATGAAGAGGAAATTGCTTCTGCTATGGGCATAATCTGCTATCTTCCAAAAAATGCCCAGATCACTCAATGGTTTCTGGATGCTGGTGCACTGCCAATAATTTATAAGCATATCCAAGAAGGGAAGGAAAAAGATCTCCAAAAGTTATTAGAGAATGCTGTTGGTGCTCTATGTCGTTTCACAGTTCCAGAGAACTTTGAATGGCAAAAGAGTGCTGCCCAGACTGGGATTATACCACTTTTAGTACAGTTGCTAGAATGTGGAACAACGTTGATAAAACAACATGCGGCATTATCTCTTGCTCAATTTTCAAAGAATTCAGTTAGGCTGAGCAGGCCAATGCCAAAGCGCAAGGGACTTTGTTGCTTCTCAGCTCCAGGAGAAATTGGCTGCCCAGTTCATGGAGGATTCTGTACCATTAAATCATCATTTTGCCTTTTGGAGGCTGAGGCAGTGGGACCTCTAGCAAGGACTCTCGAGGAATCTGACCCTGGAGCTTGTGAGGCTTCTTTAGATGCACTATTGACATTAATTGAAGGTGAAAGGCTGCAGAGCGGTATTAAGGTGCTTGCAGAAGCAAATGCCATACCACTAATGATAAAATTTCTCAGCTCCCCGTCCATTGGATTGCAGGAGAAGTCTCTACATGCTTTGGAAAGGATTTTCAGGCTTGTGGAGTTCAAGCAGATGTATGGAGCACAAGCTCATATGCCTCTTGTTGACTTAACTCAGCGCGGTAATGGCAGTATAAGATCTTTGGCTGCTAGAATATTGGCACACTTGAATGTGCTTCATGATCAGTCTTCTTATTTCTAA 3144 0.4052 MMVAEAFASGVNGPTTEAISQIADIISEFVLYAADVLVKKDSFKELATYLQRIVPVLNEVREITVSNSNIFDHSIEILNREIRDANQLRLECSKKSKVYLLMNCRTIVKRLKNNTSEICRALGLLPLATSCLSSGIIEQIEGLRDSMQKAEFKAAIAEEEILEKIESGIQEKNVDRYYANNLLFLIAEAVGITKENSTMKKELEEFKTEIENARLRKDLAEAIQMDQIIALLERADAATSPREKELKYFAKRKSLGNQPLESLQSFICPITRDVMVDPVETSSGQTFEKSAIEKWFREGNAMCPLTMTPLDTSVLRPNKTLKQSIEEWKDRNTMITIASMREKLQSGDDDEVQQCLATLQDLCEQKDQHREWVILENYIPLLIQLLGAKNREVKNNALVILCMLAKDSDHAKERIAKVENAIESIVRSLGRRVLERKLAVALLLELSKYDLIQEYIGKVQGCILLLVTMSSSDDSQAARDATELLDNLSYSDQNVLKMAKANYFKHLLHRLSTGPDDVKKIMATTLAEMELTDHNKESLFEGGVLDPLLKLVTHVDIQVKIVAIKALRNLSSLKKNGIQMIQQGAVRPLLDLLFHHGIPSSSLREHVAAIIMLLAASTIYQDGEAPVSLLESDEDVFNLFSLVRIQVPDVQQNILQAFNALCQSPSATYIMAKLIECSAVQELVQLCEHENLNLRASAVKLFSCLVDSIDEASILENITQKSIETLLKILKTSSDEEEIASAMGIICYLPKNAQITQWFLDAGALPIIYKHIQEGKEKDLQKLLENAVGALCRFTVPENFEWQKSAAQTGIIPLLVQLLECGTTLIKQHAALSLAQFSKNSVRLSRPMPKRKGLCCFSAPGEIGCPVHGGFCTIKSSFCLLEAEAVGPLARTLEESDPGACEASLDALLTLIEGERLQSGIKVLAEANAIPLMIKFLSSPSIGLQEKSLHALERIFRLVEFKQMYGAQAHMPLVDLTQRGNGSIRSLAARILAHLNVLHDQSSYF 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00529 1005 SMART Ubox_2 265 328 IPR003613 GO:0004842|GO:0016567
Bach6g00529 1005 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 543 585 IPR000225 GO:0005515
Bach6g00529 1005 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 17 1005 - -
Bach6g00529 1005 SUPERFAMILY RING/U-box 261 334 - -
Bach6g00529 1005 Coils Coil 140 160 - -
Bach6g00529 1005 CDD RING-Ubox_PUB 266 315 IPR045210 -
Bach6g00529 1005 Gene3D - 434 633 IPR011989 -
Bach6g00529 1005 Coils Coil 75 95 - -
Bach6g00529 1005 SMART arm_5 573 616 IPR000225 GO:0005515
Bach6g00529 1005 SMART arm_5 532 572 IPR000225 GO:0005515
Bach6g00529 1005 SMART arm_5 752 796 IPR000225 GO:0005515
Bach6g00529 1005 SMART arm_5 799 839 IPR000225 GO:0005515
Bach6g00529 1005 SMART arm_5 366 406 IPR000225 GO:0005515
Bach6g00529 1005 SMART arm_5 449 490 IPR000225 GO:0005515
Bach6g00529 1005 SMART arm_5 917 957 IPR000225 GO:0005515
Bach6g00529 1005 Pfam U-box domain 266 332 IPR003613 GO:0004842|GO:0016567
Bach6g00529 1005 ProSiteProfiles U-box domain profile. 261 335 IPR003613 GO:0004842|GO:0016567
Bach6g00529 1005 Coils Coil 196 223 - -
Bach6g00529 1005 Gene3D - 634 854 IPR011989 -
Bach6g00529 1005 Gene3D - 333 433 IPR011989 -
Bach6g00529 1005 Gene3D - 874 1003 IPR011989 -
Bach6g00529 1005 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 264 332 IPR013083 -
Bach6g00529 1005 SUPERFAMILY ARM repeat 337 995 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00529 Bach-Chr6 3898053 3902497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00529 264 1005 U-box Gene Family AT1G76390 28.408 1.74e-66 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00529 - - qsa:O6P43_027410 1415.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach6g00529 6 3898053 3902497 Bach6g00529 6 3898053 3902497 ECH