Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00523 ATGTTAGATCACATGGAATATTCTCATTCAGCAGCATCTGCAGAAGCAGAAGCAGAAACTTACAGCAGAACAAGTTCACCACCAAGCTTGAGAAAGAAGAAGAGCAATAACCAGAGAAGGTTCAGTGACGAACAAATCAAATCATTGGAAAGCATGTTTGAGACTGAGACAAGGCTTGAATCTAGAAAGAAGTTGCAGTTGGCGAGAGAGCTTGGCTTGCAACCAAGGCAGGTTGCTATATGGTTTCAGAACAAGAGAGCTCGATGGAAGTCAAAGCAACTTGAGCGAGACTACAGCATACTCCGAGCCAATTATAATAGCTTGGCTTCACGGTTTGATGCTCTCAAGAAGGAGAAGCAGGCATTGCTCATACAGTTGCAGAAGCTGAATGATCTGATACAAAAGCCACAAGAGCAAATTCAGCGTTCTGCAGAAGTTAAAGCTGCAAACAGCATGGATAGTGAATCTGAAAATGGAGACAACATCAAATGCCAACCTGAGCTAAATCCAAGCCCATCAATGGAAAGATCAGAACATGTACTTGGAGTTCTCTCAGATGATGATAGCAGCATAAAGGCAGGGTATTTTGGCCTTCAAGATGAACCTAGTCTTCTGAATCTTGTTGATCATGCTGATGGTTCCTTGACATCACCAGAAGATTGGGGCACGCTTGATTCCAATGTTATCTTAGGCCAATCTACTAGTGACTACCAATTGTGGGATTTCTGGTCCTGAATGAAACAGAACCGTTAAACAATGTGTGAACGAAACGTATGCAAAAGAGGTCAGCAGGGAAACTTGAGGGCAATGGGGAAGTGAGAAATTTTCTGTACACCAATTAGTTTATAGGAAAGGAGTTGAATTGTAGGGAATTAGACTTCAGGCCATACTGCACATGTTTGATATCTAGAGAATTAAGGTTGTCAAGCCATGAAATGAGCCAAGTTTTTTGCACAATAAAGATTGGTGTGCATGAGAGATGTCAAGAATGATGCACAACTTGAAAAACCAACCCATGATACATGTACCTGTTCAACTGCAAATCTGGAGTTGGTAATATGTCCATGATGGGAACCAAACCCCAGTTTTTG 1091 0.418 MLDHMEYSHSAASAEAEAETYSRTSSPPSLRKKKSNNQRRFSDEQIKSLESMFETETRLESRKKLQLARELGLQPRQVAIWFQNKRARWKSKQLERDYSILRANYNSLASRFDALKKEKQALLIQLQKLNDLIQKPQEQIQRSAEVKAANSMDSESENGDNIKCQPELNPSPSMERSEHVLGVLSDDDSSIKAGYFGLQDEPSLLNLVDHADGSLTSPEDWGTLDSNVILGQSTSDYQLWDFWS 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00523 244 MobiDBLite consensus disorder prediction 147 174 - -
Bach6g00523 244 Gene3D - 29 99 - -
Bach6g00523 244 SUPERFAMILY Homeodomain-like 20 94 IPR009057 -
Bach6g00523 244 Coils Coil 91 132 - -
Bach6g00523 244 MobiDBLite consensus disorder prediction 15 32 - -
Bach6g00523 244 ProSiteProfiles 'Homeobox' domain profile. 32 92 IPR001356 GO:0003677
Bach6g00523 244 MobiDBLite consensus disorder prediction 147 172 - -
Bach6g00523 244 CDD homeodomain 38 93 IPR001356 GO:0003677
Bach6g00523 244 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 29 163 IPR045224 GO:0003700
Bach6g00523 244 FunFam Homeobox-leucine zipper protein ATHB-7 20 92 - -
Bach6g00523 244 MobiDBLite consensus disorder prediction 1 46 - -
Bach6g00523 244 Pfam Homeobox associated leucine zipper 92 133 IPR003106 GO:0006355|GO:0043565
Bach6g00523 244 PRINTS Lambda-repressor HTH signature 63 72 IPR000047 GO:0003677
Bach6g00523 244 PRINTS Lambda-repressor HTH signature 72 88 IPR000047 GO:0003677
Bach6g00523 244 Pfam Homeodomain 38 90 IPR001356 GO:0003677
Bach6g00523 244 SMART HOX_1 35 96 IPR001356 GO:0003677
Bach6g00523 244 ProSitePatterns 'Homeobox' domain signature. 67 90 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00523 Bach-Chr6 3835430 3836618 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00523 36 244 Homeobox Transcription Factor Family AT2G46680 53.070 1.39e-66 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bach6g00523 Homeodomain 2.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00523 K09338 - qsa:O6P43_027419 353.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach6g00523 6 3835430 3836618 Bach6g00523 6 3835430 3836618 ECH