Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00519 ATGGAGGATTTAATGATCTCCCCAACTTCATCTTCCTCTCTAGTTGTGGAAACCCCACCAACCCTTCAGCAAAAGCTTCAGTTTTTACTCCAGAGCCAACAAGATTGGTGGGTCTATGCCATTTTCTGGCACACCTCAAACGATGACAATGGCAATCTCTTCCTCTCTTGGGGCGATGGCTATTTCCAAGGCAACAAAGATACTTCTCCAAGAATCGCCACAGCCCACAACTATCCCATCTCAACACAGCTTCACAGTGAGCGAAGGAAAGTCATGAAGGGAATCCAATCTCTCATCAGTGACAACCACAACGGCAACAGCAATATCATGGATCATATGAGCACGAACGGAGACCTCAATGACGCTGAGTGGTTCTACGTCATGTCGTTAACCCGCACCTTCCCCATTGGTGACCATCATCATGGATCTTCCTCTCTCCTCAGCAAGGCCTTCACTTCCTGTTCTTCACTTTGGGTGAAGAGTGAGCATGAGCTTCAGTTTTACAACTGCGAAAGAGCCAAAGAGGCTTTCATGCATGGGATTGAAACCCTCGTTTGCATCCCAACCTCTAATGGAGTTGTTGAGCTGGGCTCCGATAATACCATGGCTGAAAACTGGGGGCTACTTCAACAAGTCAAGTCTCTGTTCGGCTCAGATCTTATTTCTCTATCTCACGCCAAGCAACCAAACCCAATACAGTTTTTTGATGACCACAACATCTCCTTCGCCGACATCGGCATTATCGCCGGAGTCCAAGAAGAGGATAATTCCACACATACCCGACAAGATAAAAGAAAGAGATTAGAAACTAGGGAGAATGACATTTCTGGGGTCAAATTCGGATCCTCTTACGTAGATTCAGAGCACTCCGATTCAGATTTTCCATTGGTTACTGCTTCAAATGCCATGTTAGAGAAAAGGCCACCCAAGAAGAGAGGGAGAAAACCTGGCCTCGGCCGTGAAACCCCGTTGAACCATGTGGAGGCGGAGAGGCAGCGTCGGGAGAAGTTGAACCACCGGTTTTATGCATTGAGGGCGGTGGTGCCAAACGTGTCGAGAATGGACAAAGCGTCTTTGTTATCGGATGCTGTTTCTTATATCAACGAGTTGAAAGCAAAGATCGAAGATTTAGAAGCAAAGCTGGTGGAGAGGGAGAGTAATAAGAAGGTGAAAGTGGAAATGGGGGATGCTACGGATAACCACAGCACCACAACCTCTACAGTGGACCAAACGGGGCCAAGTGCTCATGGTTCTTCTTCTTCTCTTGAGGTTGACGTCAAGATCATAGGAGCAGATGCTATGGTGAGGGTTCAATCGGAGAACACGAACCACCCAGGAGCCAGGTTAATGGGTGCACTGAGAGACCTCGAGTTTCAGGTTCACCATGCCAGCATGTCTTGTGTTAATGATATAATGCTTCAAGATGTTGTGGTGAAGGTTCCTCATGGGTTGAGAAGTGAAGAAGGTCTAAAATCTGCAATTCTCGCAAGACTTGATCAGTAG 1503 0.4717 MEDLMISPTSSSSLVVETPPTLQQKLQFLLQSQQDWWVYAIFWHTSNDDNGNLFLSWGDGYFQGNKDTSPRIATAHNYPISTQLHSERRKVMKGIQSLISDNHNGNSNIMDHMSTNGDLNDAEWFYVMSLTRTFPIGDHHHGSSSLLSKAFTSCSSLWVKSEHELQFYNCERAKEAFMHGIETLVCIPTSNGVVELGSDNTMAENWGLLQQVKSLFGSDLISLSHAKQPNPIQFFDDHNISFADIGIIAGVQEEDNSTHTRQDKRKRLETRENDISGVKFGSSYVDSEHSDSDFPLVTASNAMLEKRPPKKRGRKPGLGRETPLNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVSYINELKAKIEDLEAKLVERESNKKVKVEMGDATDNHSTTTSTVDQTGPSAHGSSSSLEVDVKIIGADAMVRVQSENTNHPGARLMGALRDLEFQVHHASMSCVNDIMLQDVVVKVPHGLRSEEGLKSAILARLDQ 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00519 500 MobiDBLite consensus disorder prediction 304 331 - -
Bach6g00519 500 MobiDBLite consensus disorder prediction 315 331 - -
Bach6g00519 500 PANTHER MYC 13 497 IPR045084 GO:0003700|GO:0006355
Bach6g00519 500 MobiDBLite consensus disorder prediction 397 421 - -
Bach6g00519 500 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 321 382 IPR036638 GO:0046983
Bach6g00519 500 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 22 216 IPR025610 -
Bach6g00519 500 Coils Coil 360 387 - -
Bach6g00519 500 SMART finulus 327 376 IPR011598 GO:0046983
Bach6g00519 500 MobiDBLite consensus disorder prediction 394 421 - -
Bach6g00519 500 CDD bHLH_AtAIB_like 319 394 - -
Bach6g00519 500 Pfam Helix-loop-helix DNA-binding domain 325 370 IPR011598 GO:0046983
Bach6g00519 500 Gene3D - 319 387 IPR036638 GO:0046983
Bach6g00519 500 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 321 370 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00519 Bach-Chr6 3782362 3783864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00519 12 498 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00870 36.382 6.24e-79 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach6g00519 bHLH-MYC_N 4.4e-49 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00519 - K13422 cave:132186976 603.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach6g00519 6 3782362 3783864 Bach6g00519 6 3782362 3783864 ECH