Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00509 ATGATACAGCAAAAAAGGCAATTCCAGATGGTGGGTGGCAACAATCCAGGGCAATACAATGACACCACTTTTACCAAAATCTTTGTTGGAGGGTTAGCTTGGGAGACTCAAAGAGACACAATGAGAAGGTATTTTGAGCAGTTTGGGGAGATCCTTGAAGCTGTTGTTATCACAGACAAGAACACTGGGAGATCCAAGGGTTATGGCTTTGTTACATTTAAGGATCCAGAGTCAGCCATGAGGGCGTGTCAGAACCCATCGCCAGTTATTGATGGGAGAAGAGCAAACTGCAATCTGGCATCTCTTGGTGCAAACAAGAATCGCCCACCCACTACTCAACATGGTGTAGGAAGGTTCAGACCAGCACCTGGGCTAGTGGCTGCGCCTGCATATCATGGTTCTTCGTCTACATTTTTCCATCAACCTACAGGACAATATACATTTCCTTATTCAGCTTATGGATATTCTGGATATTCACAGGAAACCATGTATCCCATGAACTACTATAGTGTCTATGGAGGACAACAGTTTTCACCTTATTACCATTCAACTGGTGCATCTGGGCCAGCAGGTTTGATCCATAATATTTACCCGTTTTATGCTCAATATGCACAGAGCAGCCAGGGTCATGGATATGGAGTCCAATATCCTCAAATGGTACAGTTCCCATTTCTGCCTCAGCACTATGGCTCTACAGGGATTTTGTCATTTCCTTCTGCAATGTCAATGCCAACTACTAGTGCAGTTACAACCACAGCAACCACAACAACAACAATAGCAGCAGCAGCCGGGGCAGGTGCTTCACAAGCAACTGGAACAGCTTCTGAACAGAACTCTTCAACTTAA 846 0.448 MIQQKRQFQMVGGNNPGQYNDTTFTKIFVGGLAWETQRDTMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPESAMRACQNPSPVIDGRRANCNLASLGANKNRPPTTQHGVGRFRPAPGLVAAPAYHGSSSTFFHQPTGQYTFPYSAYGYSGYSQETMYPMNYYSVYGGQQFSPYYHSTGASGPAGLIHNIYPFYAQYAQSSQGHGYGVQYPQMVQFPFLPQHYGSTGILSFPSAMSMPTTSAVTTTATTTTTIAAAAGAGASQATGTASEQNSST 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00509 281 Gene3D - 1 118 IPR012677 -
Bach6g00509 281 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 27 84 IPR000504 GO:0003723
Bach6g00509 281 CDD RRM_RBM24_RBM38_like 25 100 - -
Bach6g00509 281 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 25 102 IPR000504 GO:0003723
Bach6g00509 281 FunFam RNA-binding protein 24-B isoform X1 12 118 - -
Bach6g00509 281 SUPERFAMILY RNA-binding domain, RBD 15 120 IPR035979 GO:0003676
Bach6g00509 281 PANTHER BOULE-RELATED 15 257 - -
Bach6g00509 281 SMART rrm1_1 26 98 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00509 Bach-Chr6 3693852 3696047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00509 21 101 C2H2 Transcription Factor Family AT2G19380 44.444 6.19e-16 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00509 - - qsa:O6P43_027433 464.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach6g00509 6 3693852 3696047 Bach6g00509 6 3693852 3696047 ECH