Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00508 ATGACACAGTCCTCTTGTTTATATATTGGCATTGAAAAGGGGTTCATAAGATTTGATTTTATATCTTCGAACCCTGACTGCCGCGCATCCATCGCAGGGAGCAAACCAGTCGTCTTGGTTCTCAGTTCTGTGAGCATAAACATGTCGGTTGGGGAACTTGCTGCCAGCTACGCTCTTATGATCCTTTTTGATGACAATATTCCTATCACTGCTGAGAAGATTTCAACCTTGGTGAAAGCGGCCAAGATTGACATTGAATCTTACTGGGCAAGCTTATTTGCTAAGCTTGCTGAGAAGAGAAACATTGAAGATATTATCCTAAATGCTGGTGGTGGTGGTGCTTCAGTTGCTGTAGCTGCTCCAGCAGCTGTCGGTGGTGGCGCTTCTGATGCACCTGCTGCTCCTGCAGCCGAGGAGAAGAAGAAGGAAGAACCCCAGGAAGAGAGTGATGATGACATGGGATTCAGCTTGTTCGATTAGGACCTCTCATCATTATGTTTTTATCCATTTTTTTGTGTTATTCCAAGTGTAGTTTCTCTATCGTTTTTGTAGGTTTTTTCGCTGTTTACAAATATATGTACCCGGGAAGGATATATGAGTATTCAAGTCATGGTTTTGGAGTGTTCTAAACTTGAGAATTTTAAGTTTAT 650 0.4231 MTQSSCLYIGIEKGFIRFDFISSNPDCRASIAGSKPVVLVLSSVSINMSVGELAASYALMILFDDNIPITAEKISTLVKAAKIDIESYWASLFAKLAEKRNIEDIILNAGGGGASVAVAAPAAVGGGASDAPAAPAAEEKKKEEPQEESDDDMGFSLFD 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00508 159 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 48 159 - -
Bach6g00508 159 FunFam 60S acidic ribosomal protein P1 48 110 - -
Bach6g00508 159 Gene3D - 48 110 IPR038716 -
Bach6g00508 159 MobiDBLite consensus disorder prediction 125 159 - -
Bach6g00508 159 Hamap 50S ribosomal protein L12 [rpl12]. 53 159 IPR027534 GO:0003735|GO:0005840|GO:0006414
Bach6g00508 159 CDD Ribosomal_P1 52 112 - -
Bach6g00508 159 Pfam 60s Acidic ribosomal protein 69 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00508 Bach-Chr6 3690117 3693323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00508 49 159 Cytoplasmic Ribosomal Protein Gene Family AT5G47700 64.865 1.08e-32 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00508 K02942 - zju:107423779 129.413