Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00503 ATGGCAGCTATTACCATTTGCTTCACCTCACCACCTTCCTTAGCAATGAAAGCCAGAGCCAAAAACACTACTTCAGCGATAGGGTTCGTTCGCTGTTCAGTAACTTTGCCTTCTTCGGTACACTTTGCTGCTGGGAATTCACAAATGTTGTCCTTAGGCGCCGTCTTCTTCCGGCAGCGTAATATTTCGGACCCTACTTCTTCTCCTTTCTCTGGGCGTAGTAGAAGAGCTAGGATTTGTACGACTTTGGCGGTGGTGGATGACGAAGTAGTGATTGCAAAAGGGGTAAACGGAGAAGAAAATATGGACCGAGAAAACAATGACGTCTCCAGCAGGATTGAAGAAGAAACGAAGCGGCTGGGAAGACCATGCGAAATTTATATCTGTAACATTCCTAGAAGCTGTGACGAAACAAAGCTCCTTGAAATGTTCAGGCCTTACGGAACTGTTGTATCTGTAGAGGTCTGCCGGAATGGTGAAACTGGTGAAAGTAGAGGATGTGGTTATGTCATAATGGCATCTATAAACTCAGCGAAAAAAGCAGTTGCTGCATTGGATGGATCAGATGTTGGGAGGCGTGAAATGCGGGTTAAATTTTCAGTTGACATGAATCGGGGAAGGAGGAATCCGGAGATAATGAACTCATCCCCGCAGAAAGTTTTCTGCTATGAAACTCCTCATAAGTTGTATGTTGGCAATCTTGCGAGGGCTGTTCAACCTGCAGAGTTGAAAAATCTTTTTAATAGATTTGGGACTGTGGTTAGCGTAAGAATTTTGCATGATATCAAAGCTGGGAAGAGCCGGATTTTTGGATTTCTATCATTTCTTTCAGAGGATGATCGTGATGCAGCAATGTCTCTTAATGGAATGGCACTTCATGGTCGTACCCTGGTAGTTAGAAAGGGAGTAGAGAGTACAGAGCTCTAACTGGAGTTTCTATGTGTGTACAAAGATGATCGTAATTTTGATTGTTTGAGAAGCAGGAAGATTTCAGTGTGTGGATTTTCT 1008 0.4355 MAAITICFTSPPSLAMKARAKNTTSAIGFVRCSVTLPSSVHFAAGNSQMLSLGAVFFRQRNISDPTSSPFSGRSRRARICTTLAVVDDEVVIAKGVNGEENMDRENNDVSSRIEEETKRLGRPCEIYICNIPRSCDETKLLEMFRPYGTVVSVEVCRNGETGESRGCGYVIMASINSAKKAVAALDGSDVGRREMRVKFSVDMNRGRRNPEIMNSSPQKVFCYETPHKLYVGNLARAVQPAELKNLFNRFGTVVSVRILHDIKAGKSRIFGFLSFLSEDDRDAAMSLNGMALHGRTLVVRKGVESTEL 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00503 308 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 227 304 IPR000504 GO:0003723
Bach6g00503 308 SMART rrm1_1 125 198 IPR000504 GO:0003723
Bach6g00503 308 SMART rrm1_1 228 300 IPR000504 GO:0003723
Bach6g00503 308 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 126 195 IPR000504 GO:0003723
Bach6g00503 308 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 229 297 IPR000504 GO:0003723
Bach6g00503 308 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 124 202 IPR000504 GO:0003723
Bach6g00503 308 SUPERFAMILY RNA-binding domain, RBD 224 302 IPR035979 GO:0003676
Bach6g00503 308 Gene3D - 93 217 IPR012677 -
Bach6g00503 308 SUPERFAMILY RNA-binding domain, RBD 120 210 IPR035979 GO:0003676
Bach6g00503 308 Gene3D - 218 307 IPR012677 -
Bach6g00503 308 PANTHER OS02G0815200 PROTEIN 74 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00503 Bach-Chr6 3662593 3663943 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00503 113 307 Eukaryotic Initiation Factors Gene Family AT3G16380 29.064 1.41e-14 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00503 - - pcin:129288259 345.125