Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00488 ATGGCCCCTTCAAAGAAATCTGACTCACAGCTTGTAAATGGTGAAGAGAAAAACCATAAACAAGAAGGAGAAGGAGACACCTTCATCTCTGCATTGAATTTGGTGAATTCCCTTGTGTTCCCAGTGACCTTGAATTCGGCCATTGAGCTTGGCATTTTTGATGTCATAGCCAAAGAAGGTGAAGGTGCCAAGCTCTCAGCCAAAGACGTTGCAGCTAAGCTCTGCAGCAAGAACCCAGAAGCACCCACAATGCTGGATCGTATCCTTGGGCTTCTGGCAAGTCACTCTGTGCTTTATTGCTCTGTTGCTGATTATGATCAGGCAGAGAGGCTCTACAGTCTCACCCCTATGGCATCTCAGTATTTTGTCAATGATGCTCAAGGTGTATCATTTGGGCACTTGATGACCTTAATTCATGACAAGGTCTTCTTGGAAAGCTGGGTGCATGGCTTGCATGCCTTTGAGTATCCAAGCTTGGACCCAAGGTTCAATGAGATTTTCAATAAAGCCATGTTCAGTTCCACCACTATAATGATGAAGAGGGTTCTTGAAACATACAAAGGTTTTGAGAATGTGAACAGATTGGTGGATGTGGGTGGTGGTGTTTGA 609 0.4466 MAPSKKSDSQLVNGEEKNHKQEGEGDTFISALNLVNSLVFPVTLNSAIELGIFDVIAKEGEGAKLSAKDVAAKLCSKNPEAPTMLDRILGLLASHSVLYCSVADYDQAERLYSLTPMASQYFVNDAQGVSFGHLMTLIHDKVFLESWVHGLHAFEYPSLDPRFNEIFNKAMFSSTTIMMKRVLETYKGFENVNRLVDVGGGV 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00488 202 SUPERFAMILY "Winged helix" DNA-binding domain 26 119 IPR036390 -
Bach6g00488 202 FunFam Caffeic acid 3-O-methyltransferase 9 122 - -
Bach6g00488 202 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 32 202 IPR016461 GO:0008168
Bach6g00488 202 Pfam O-methyltransferase domain 147 202 IPR001077 GO:0008171
Bach6g00488 202 Gene3D Vaccinia Virus protein VP39 123 202 IPR029063 -
Bach6g00488 202 PANTHER O-METHYLTRANSFERASE 34 201 IPR016461 GO:0008168
Bach6g00488 202 Pfam Dimerisation domain 43 93 IPR012967 GO:0046983
Bach6g00488 202 MobiDBLite consensus disorder prediction 1 23 - -
Bach6g00488 202 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 201 IPR029063 -
Bach6g00488 202 Gene3D - 8 121 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00488 Bach-Chr6 3537001 3537743 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00488 31 202 Monolignol Biosynthesis Gene Families AT5G54160 45.263 4.06e-49 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00488 K13066 - gmx:100789402 225.713