Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00477 CAGGAAAAAACCAAGTGGGTATCTCTGAATTGATACGGAAACAGAGACCCAGTTGCGGTTTCACTCAGCTGGTTCGGTTTCTTAATGGATTTTGGAGGCACCAATCAGCCCCGCTTGATCGGGGATTACATACTTGGACCCAGAATTGGGTCGGGTTCGTTCGCTGTGGTGTGGCGCTCAAGGCATCGCCACACGGGTTTGGAGGTTGCTGTGAAGGAGATTGATAAGAAGCAGCTTAGCCAGAAAGTTAGTGAGAATTTACTTAAAGAGATTTCTATTCTCAGCACCATCAATCACCCAAATATTATTCGTCTTTTCGAAGCAATTCAGACCCAGGATAGGATTTACCTTGTTTTGGAGTATTGTGGTGGTGGTGACCTTGCTGCTTACATTCAACGGCATGGGAAAGTTTCAGAAGCCATTGCTCGGCATTTCATGAGGCAATTAGCTAAGGGGTTGCAAGTACTTCAAGAAAAGCACCTCATTCACAGAGATTTAAAACCACAGAACTTACTATTGGCAACTGGTGAAGCTACACCACTGCTGAAAATAGGGGATTTTGGTTTTGCAAGGTCTCTCACACCCCAAGGGTTGGCAGACACACTATGTGGTTCTCCTTTGTACATGGCTCCGGAGATAATTCAAAATAAAAAATATGATGCCAAGGCTGATTTATGGAGTGTTGGGGCAATATTGTTCCAGCTGGTCACTGGGAGGCCACCATTTGATGGAAATAGTCAATTGCAGCTTTTTCAGAACATTTTGACAGCTACTGAACTGCAGTTTCCACAAGAGGCTTTGAAAGAGTTACATTCAGACTGCTTGGATCTTTGCAGAAGCCTTTTACGTCAAAACCCAGTTGAACGATTATCATTCAAGGAGTTCTTCGATCACAAGTTCCTACAGGATCCCAGGTCTTTGGTGAATGTTGAGCAGTCTTTGTTACTTTTATCGGAAAAATTTATGGGTCATCAATTTGGCATCTCTGCCTCTGACAAAGGATTTCCATTGTATGCTGGGCATCATGTTAAGTCATATGTTGATGATCCTGCGGTAAATAGTTCAGCTGTCGATGAGACCATGACAGCAGGCACTAAAAGGGCACAGGGGTTACCTTCAACTATTGTGCATGATACGGTTGGGAAATCTGTTGGTGGTGCTCATTTGTCAAACAAGCCTCTAGTTTCTCATTTAATGGAGTCCATTGAGAAAGACTATGTCCTTGTCAATCCTCATTACGAGTCCTTGGAGGCTTTCTCTGATTACTTTGAGGCATCTGTTCAAGATAGTTCCACAAGCAGGGTTTCTATCTATACTTCAAACAGGAATGAACTTGAAATTGGAGTTGCAGAGCAAGTAAAGGAAGCCACTTCCGGTGCTGATAGAGCAGAAAAGTTAGAAAACAATGAACTTGAGGCATCAGCAGCTTCCTGTGCATTTGCTGCCCTAATGAAAGTGCAGGGAACATCCCCAATGCAGCCTTCAAATAGGTTACGATTGTTATATCAGTATGTGCAGATCCTTGGAGAACTTTCGCAAGAAAAGTATAATGCTGGAGAGTATCTAGAATCGTTTGCAGTTGAGCTGGTCGTTTTGGCTATATGGAAGAAAGCTCTAGAAATTTGTGACTCTTGGCTGGCCTCTACTACTGAGAAAAAAGATTTTGTTAATCCTTCATCTGTCTCGTCATGGGCCGAGCAAGGGTTTATTGTTGCAGTTGATCGTGCTGAAAAATTATCATGTCATATTCAAAGTATTGATGGTGCAACAGAGATGCCAGATGCAATGGAGATCATATTCCAAAAGGCGCTCTCAGTTGGGAAAAGTGGCGCTGTAAGTAACGTCGATGAGTATATGGAGAACAAAGGCAAAGCAGCTGCATCTTACTCAAAAGCAATGCTTCTACTTTCATTCATTGTGGGAGAAGCAGTACACCTTCCACTGAACCGGCCATTTTCACTTACTCCCGCTAATAAGAAGCGAATCTTACAATATATTCTCTACCTGCAATCCCATCAACTTGAGTCTTCATCATCAGAGCCCTCTTCTAAGGCAGCCTATATTCCTCGTTAAGTAAATAACGAGTTGTATATAGTTTTACCTGCATCATCACTTATGGAATTGCTGATGAAGTGAAGCAATTTGTTGGAGACGCAGATGTTGACTTCCTTTTTGTGTGGACGTGAGAAAAAGACCTTTTGTATAGAGACTCAGATGGCTTACCATGGCATAGTAAAGTAACGTTGCCTTTATTGCATGGATTTATGTAAATAATATGGTTAATTCTTTACTGTGCAATTTGTAAAAAAACAAATGTCACCTTATTTGTACAGTTCGTAATCTAGTATATATAATCAATGAATTCAAATTACTTAAA 2377 0.4161 MDFGGTNQPRLIGDYILGPRIGSGSFAVVWRSRHRHTGLEVAVKEIDKKQLSQKVSENLLKEISILSTINHPNIIRLFEAIQTQDRIYLVLEYCGGGDLAAYIQRHGKVSEAIARHFMRQLAKGLQVLQEKHLIHRDLKPQNLLLATGEATPLLKIGDFGFARSLTPQGLADTLCGSPLYMAPEIIQNKKYDAKADLWSVGAILFQLVTGRPPFDGNSQLQLFQNILTATELQFPQEALKELHSDCLDLCRSLLRQNPVERLSFKEFFDHKFLQDPRSLVNVEQSLLLLSEKFMGHQFGISASDKGFPLYAGHHVKSYVDDPAVNSSAVDETMTAGTKRAQGLPSTIVHDTVGKSVGGAHLSNKPLVSHLMESIEKDYVLVNPHYESLEAFSDYFEASVQDSSTSRVSIYTSNRNELEIGVAEQVKEATSGADRAEKLENNELEASAASCAFAALMKVQGTSPMQPSNRLRLLYQYVQILGELSQEKYNAGEYLESFAVELVVLAIWKKALEICDSWLASTTEKKDFVNPSSVSSWAEQGFIVAVDRAEKLSCHIQSIDGATEMPDAMEIIFQKALSVGKSGAVSNVDEYMENKGKAAASYSKAMLLLSFIVGEAVHLPLNRPFSLTPANKKRILQYILYLQSHQLESSSSEPSSKAAYIPR 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00477 662 SMART serkin_6 15 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach6g00477 662 SUPERFAMILY Protein kinase-like (PK-like) 11 308 IPR011009 -
Bach6g00477 662 CDD STKc_ATG1_ULK_like 21 272 - -
Bach6g00477 662 FunFam Non-specific serine/threonine protein kinase 4 95 - -
Bach6g00477 662 Pfam Protein kinase domain 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach6g00477 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Bach6g00477 662 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 8 533 IPR045269 GO:0004674|GO:0006914
Bach6g00477 662 ProSiteProfiles Protein kinase domain profile. 15 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach6g00477 662 Gene3D Transferase(Phosphotransferase) domain 1 6 300 - -
Bach6g00477 662 FunFam Serine/threonine-protein kinase ATG1 7 308 - -
Bach6g00477 662 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00477 Bach-Chr6 3431171 3436258 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00477 5 276 CBL-interacting serine-threonine protein kinases AT2G30360 37.410 6.47e-54 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Bach6g00477 Pkinase 2e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00477 - K08269 pcin:129288152 850.892