Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00473 ATGTTTCATGATCATCAGTCTCCAGAGACAACTACAACTACTGAATCTTACAATTCATCATCTGGGTTAGGGTTACACCAGCAAGATGCAGCAGCTACCAATATCAATTTCTACCACAGGAAGCTAGACTTGATGGAGTTATCACTTGGGAACAACAAAGATAGTGAAGCTAATTTCCGTGGAGGAGGAGCAGGTTGTAGCAGCAGCAGTGGTGGCACAAACAATAATAATAACAACAACAATGATATTCCCATCGAGAAGGAGCACATGTTTGATAAAGTAGTGACACCAAGTGATGTTGGCAAACTGAACCGGCTTGTGATACCAAAACAGCATGCTGAGAAGTATTTCCCCCTTGACTCCTCCACCAACGAGAAAGGCCTTCTTCTCAATTTCGAGGACAGGAATGGCAAGTTGTGGCGCTTCAGGTACTCTTACTGGAACAGCAGCCAAAGCTATGTGATGACCAAAGGTTGGAGCCGTTTTGTTAAGGAGAAAAAGCTTGATGCCGGTGACATTGTGTCGTTCCAGCGCGGTGTTGGCGATTTGTACAGGCATAGGTTGTACATAGATTGGCGGCGCCGGCCTGATCACGGTCACGATGCCGCCACGCTGATTACACCTTTCCTTCTTAACAATCAGCAGCATTTATCACAGTATTCCATTAAGTGGAGTGGCAGATTGTACTCGCTGCCCACGCAAGGGCCAGGATCTATTCCCTGCCACCAGCACCAGTATCTACAAGTTCAGCACTTGAATTACAACAACATGTATCCATTTCATCAACAAAATCATCGTTTCCAGCAATATTACCATGGTGGTGGGAGTAGCCACAACTATAATGAGCTCAATTCTGGATCTGGGTCAATGTGTTATAATCATCTACGGTCAACAACAGCATCAACACCATCAATGGATGATAATCAAGGACAACAAATGGTTGGTGGCAATGCTCCAATGATCATTGATTCAGTGCCAGTTTCTCATCATCATCATCATCATCAACATCACCATGGTAAGAGTACCAATACTACTACAGCTACTACTACGGGGAAACGCCTTAGACTATTTGGGGTTACCATGGAATGTGCTTCACCAGCTGAAGATCCCAAATGTGCTTTATTATCATCATCATCATCAGTGGCACATGTGGAAATGACTAGTTCACTTCCCACTTGTTCTATTCCACCTCTTCACTTGAGGGTGGCCCATGAAGACCACGCACCGCTTTCATCATCAGCAAGGTTTGATCAGCTGGAGAGAGGTCAAACTTCAATGCTTTTCGATTTGGAGCCCTCCTTGCAATACCGGCAATGA 1317 0.4487 MFHDHQSPETTTTTESYNSSSGLGLHQQDAAATNINFYHRKLDLMELSLGNNKDSEANFRGGGAGCSSSSGGTNNNNNNNNDIPIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSTNEKGLLLNFEDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGDLYRHRLYIDWRRRPDHGHDAATLITPFLLNNQQHLSQYSIKWSGRLYSLPTQGPGSIPCHQHQYLQVQHLNYNNMYPFHQQNHRFQQYYHGGGSSHNYNELNSGSGSMCYNHLRSTTASTPSMDDNQGQQMVGGNAPMIIDSVPVSHHHHHHQHHHGKSTNTTTATTTGKRLRLFGVTMECASPAEDPKCALLSSSSSVAHVEMTSSLPTCSIPPLHLRVAHEDHAPLSSSARFDQLERGQTSMLFDLEPSLQYRQ 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00473 438 SUPERFAMILY DNA-binding pseudobarrel domain 88 181 IPR015300 -
Bach6g00473 438 MobiDBLite consensus disorder prediction 60 84 - -
Bach6g00473 438 SMART B3_2 91 196 IPR003340 GO:0003677
Bach6g00473 438 MobiDBLite consensus disorder prediction 62 84 - -
Bach6g00473 438 Gene3D - 85 203 IPR015300 -
Bach6g00473 438 ProSiteProfiles B3 DNA-binding domain profile. 91 196 IPR003340 GO:0003677
Bach6g00473 438 Pfam B3 DNA binding domain 91 195 IPR003340 GO:0003677
Bach6g00473 438 MobiDBLite consensus disorder prediction 328 347 - -
Bach6g00473 438 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 34 372 IPR044800 GO:0003700
Bach6g00473 438 FunFam B3 domain-containing protein 84 204 - -
Bach6g00473 438 CDD B3_DNA 89 178 IPR003340 GO:0003677
Bach6g00473 438 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00473 Bach-Chr6 3395741 3397057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00473 86 364 RAV Transcription Factor Family AT2G46870 50.883 8.83e-77 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bach6g00473 B3 1.4e-28 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00473 K09287 - gmx:100781424 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach6g00473 6 3395741 3397057 Bach6g00473 6 3395741 3397057 ECH