Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00472 ATGGACAGCCCAGAAGAAATACTGGAAAACATGCCTCTGGGATTCAGATTCAAACCCACAGATGAAGAGCTTGTCAATCACTATCTCAAACTCAAGCTGTTGGGTGACAATTTACGTGTCAGGATTATTCGTGAGATTGACATTTGCAAGTTTGAGCCTTGGGACTTACCAGAGCTTTCGGTGGTGAAATCGAACGACCCAGAATGGTTTTTCTTCAGTCCTCGTGATTTGAAGTATTCAAACAGTAATCGGTCTAACAGGGCAACCAAAGCTGGGTTCTGGAAACCCACTGGGCAAGACCGTAAAGTTAAAGAAAGAGGTACCAACAATGTCATTGGGACGAAGAAGACTCTGGTTTTCTACAAAGGTCGTGTTCCTCATGGCGTCAAGACCAATTGGATTATACATGCATACCACGCAACTACTTTTCCTGTTGACCAGAGGACCTATGTTTTATGTCGTTTGATGAAGAAACCTGGGAAAAAAACAGAGGAGGGAGCTGATGAATTGATCTATAATGAAGGGGAGCCAAGTGGCCATATGGCTTCTGACTATGAAAATCAAGCTGCGGAAGATCAGATTCCATATATGAATAGTTTGGAAGAAGTGAATCTGGAATCAATCTTTTCGGAACCACCTCAGGCAGAGGTGCATGCCTTTGATTCTCTACAGCAGTCTCCGTTTGTCTTTGATCAAGAACCACTTTTCCCTGTTTGTCTTCCTGACACTACTGAAGAGGAAGGTGATGCATTCTTGAATGCACTTATAGCTGATGAGAATATTGTTTATACTGAAGAAAGGAGTCACGCATTTGTCACTGACTCCACCCCATCAGAGTCATTGAGAAAGGCGTACTATGAAAGTAGTGATACAGAAGCTGAAGTAATCTCTGCACGGTCTAGCACAATTCTGGACTTTCCAACAGCATCTAGCCAGCATGCTGGTCCAAGGGAATACCAGATAATGAAAATGGTTAAATCATCGCAGTATGGCGCTGTACATGCTGGTTCTCAACTCACTTCCTCCGGTGACTCCACCAAAGATCCAAATTTGTCTATCAACTGCATTTCAATTGATAGCCCTCCTTCCCCTCTAAGGAGATACAAACCTCAGGGTCACCCAAAACCATCACAGAAAGCTTCTGCAAGAAGGCAAACACAGAGAAAGGTTTCAAGCAAAGAAATATCCAAAAATGAGGCTCAAAAGGAAATATCCATCATTCAATCAAACAAAGATCAGAGAAAAACTCAAAGTACCAGTTCTAGAAAGAATTCAGAAACCACAAGCACTCAATCATCTGAGGAATTTCATCATGATAAGATCTGCGAGGAGTTTATGTGGGACTCCAAATGGCGCAAGCTTATTGCATCTTTCTTATCATAG 1383 0.4237 MDSPEEILENMPLGFRFKPTDEELVNHYLKLKLLGDNLRVRIIREIDICKFEPWDLPELSVVKSNDPEWFFFSPRDLKYSNSNRSNRATKAGFWKPTGQDRKVKERGTNNVIGTKKTLVFYKGRVPHGVKTNWIIHAYHATTFPVDQRTYVLCRLMKKPGKKTEEGADELIYNEGEPSGHMASDYENQAAEDQIPYMNSLEEVNLESIFSEPPQAEVHAFDSLQQSPFVFDQEPLFPVCLPDTTEEEGDAFLNALIADENIVYTEERSHAFVTDSTPSESLRKAYYESSDTEAEVISARSSTILDFPTASSQHAGPREYQIMKMVKSSQYGAVHAGSQLTSSGDSTKDPNLSINCISIDSPPSPLRRYKPQGHPKPSQKASARRQTQRKVSSKEISKNEAQKEISIIQSNKDQRKTQSTSSRKNSETTSTQSSEEFHHDKICEEFMWDSKWRKLIASFLS 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00472 460 Pfam No apical meristem (NAM) protein 12 139 IPR003441 GO:0003677|GO:0006355
Bach6g00472 460 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
Bach6g00472 460 Coils Coil 383 403 - -
Bach6g00472 460 MobiDBLite consensus disorder prediction 401 431 - -
Bach6g00472 460 MobiDBLite consensus disorder prediction 336 359 - -
Bach6g00472 460 ProSiteProfiles NAC domain profile. 11 158 IPR003441 GO:0003677|GO:0006355
Bach6g00472 460 SUPERFAMILY NAC domain 9 158 IPR036093 GO:0003677|GO:0006355
Bach6g00472 460 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 10 412 - -
Bach6g00472 460 MobiDBLite consensus disorder prediction 336 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00472 Bach-Chr6 3385720 3388419 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00472 8 167 NAC Transcription Factor Family AT4G35580 58.824 2.22e-65 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bach6g00472 NAM 1.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00472 - - pcin:129287580 399.823