Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00461 ATTTGGTACTAGCCCAGTTGAACAAATTAAAACCAACGATCTTCTCGGTCCCTTCCCTCTCGAGAAAATCAGCGAAAGCTGATTGCGTTGTTCTAAAAATCACTGTCAATGGCGCCTGCAGCTGAGCACGACGAAGATTTTAAGGACGAGAAGAACCCTCGTCCTCTCGACGAGGATGACATCGCCCTCCTCAAAACCTATGGTTTAGGACCTTACTCCACAAGTATAAAGAAAGCGGAGAAGGAAATCAAAGAGATGGCCAAAAAGGTCAATGATTTATGTGGTATCAAGGAGTCTGATACTGGTTTAGCAGCACCAAGCCAGTGGGATCTTGTTTCTGATAAGCAGATGATGCAGGAGGAACAACCTCTTCAGGTGGCAAGGTGCACAAAGATAATAAATCCAAACTCTGAAGATGCTAAGTACGTAATCAATGTAAAGCAGATTGCAAAGTTTGTTGTTGGGCTAGGTGACAAAGTTTCTCCCACTGACATAGAGGAAGGGATGCGTGTTGGTGTTGATAGAAATAAATATCAGATTCAAATTCCATTGCCTCCTAAAATTGATCCTAGCGTTACCATGATGACTGTTGAAGAGAAGCCTGATGTGACTTACAACGACGTTGGTGGTTGTAAGGAGCAGATTGAAAAGATGCGAGAAGTTGTTGAACTTCCCATGCTTCATCCGGAGAAATTTGTCAAACTAGGAATTGATCCTCCAAAGGGTGTTCTTTGCTATGGACCACCAGGAACTGGCAAAACACTTTTAGCCAGAGCTGTGGCTAATAGGACTGATGCATGCTTTATAAGGGTCATTGGAAGTGAGCTTGTGCAGAAATATGTTGGTGAGGGGGCTCGGATGGTTCGTGAACTCTTTCAGATGGCTCGCTCAAAGAAGGCATGCATTGTGTTTTTTGATGAAGTTGATGCAATTGGAGGTGCAAGGTTTGATGATGGTGTTGGTGGGGACAACGAGGTTCAGCGCACAATGCTTGAAATTGTGAATCAGCTTGATGGATTTGATGCTCGTGGAAACATCAAAGTTCTGATGGCAACAAACAGGCCTGATACTTTAGATCCAGCTCTACTACGTCCTGGGCGGTTGGATCGGAAGATTGAATTTGGCCTTCCAGATTTGGAGAGTAGGGCGCAGATATTCAAGATACACACAAGAACCATGAACTGTGAAAGGGATATCCGATTTGAGCTTTTGGCTCGGCTTTGCCCAAATTCCACTGGAGCTGATATAAGGAGTGTATGCACTGAAGCTGGTATGTTTGCTATCCGTGCTCGAAGGAAGACTGTGACAGAGAAAGATTTCCTGGATGCAGTAAATAAAGTCATCAAAGGATACCAAAAGTTCAGTGCAACGCCCAAGTATATGGTTTACAACTGAGTTATTGTTTTCCCATACTTAGGCAAAAAAACATGGTTTTCCCAGATGAACTTGTTCTAAAAAGCATATGCGTCTTTCATGAGCAGCCTGAAACGAATTGAACATGTATTTTATAAAGTTGACTATTGAGCATCTAAAT 1534 0.4302 MAPAAEHDEDFKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKEMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKIEFGLPDLESRAQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00461 428 SMART AAA_5 203 342 IPR003593 GO:0016887
Bach6g00461 428 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 418 IPR027417 -
Bach6g00461 428 Pfam ATPase family associated with various cellular activities (AAA) 207 339 IPR003959 GO:0005524|GO:0016887
Bach6g00461 428 MobiDBLite consensus disorder prediction 1 22 - -
Bach6g00461 428 FunFam 26S protease regulatory subunit 7 341 412 - -
Bach6g00461 428 Coils Coil 427 428 - -
Bach6g00461 428 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 8 414 - -
Bach6g00461 428 Gene3D - 341 422 - -
Bach6g00461 428 Coils Coil 40 60 - -
Bach6g00461 428 FunFam 26S protease regulatory subunit 7 160 339 - -
Bach6g00461 428 Pfam AAA+ lid domain 362 405 IPR041569 -
Bach6g00461 428 ProSitePatterns AAA-protein family signature. 310 328 IPR003960 GO:0005524|GO:0016887
Bach6g00461 428 Gene3D - 34 159 IPR012340 -
Bach6g00461 428 CDD RecA-like_PAN_like 168 338 - -
Bach6g00461 428 Gene3D - 160 339 IPR027417 -
Bach6g00461 428 FunFam 26S protease regulatory subunit 7 35 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00461 Bach-Chr6 3312655 3316556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00461 172 393 Calmodulin-binding Proteins AT3G56690 37.668 9.43e-42 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00461 K03061 - gmx:100796358 841.262