Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00458 ATGGGTGACTCATATGGAAGTTTGAGTGATTCTTCGGCCGTTGAAGTAACCGGCAAGATCATGGTAGTAGCTATAATTATCCTCTTCTTTGTGGTTGTGTTTGTTCTCTTCCTCCATCTCTATGCCAAATGGTTCTGGTGGCGAATTGAAGAAAGCACCTCTCCTCAGCCTCGCAGCCGCCGTCGCCGCCGGTTCGTCTTCGCCCCTGGTCAAGACCCAGCTATCTACGGAGCTCAGCGAAGTGGGCTCGATCCTGCAGTCCTTAGGTCCTTACCTGTCCTAGTGTTCCAACCAGAAGAGTTCAAAGATGGTTTGGAATGCGCTGTTTGCCTCTCTGAGCTTGTTCAAGGAGAAAAGGCTAGGATTTTACCCGAATGCAATCACGGGTTTCACGTAGATTGCATAGATATGTGGTTCCAATCCCACTCCACATGCCCCCTTTGTAGGAGCCATGTCCATTCTGGATACTCAAAATCCAGTGATAGTTCAGATGCTAGAGAAAATGCCTCTGAGAACACTGAATCACTGGTGGCAGAAAATTCAGCTGCTTTGAGTAGCTCAGAGTCTCCAAATTTTCCCACGAATGTATTAATTTGGGGGAACCAGACCCAAGTAAGTTCTGTTGGTGCTTCCTTGGAAGTAGAAGGTCCTTCTCCTCAACCTCCTTGCTCTTCATCATCTGCTACTACATCTTCTTCATCGGCGAGTACTAGTAGTAATAGACATCATGGAATTTTGGTGATTGATATACCAAGTGAGATCAATTCATCGGCTTTATCACCTTCTGCAAGCAGGTTTCCTGAAGACGAGCTGAAATCACCAATGACAACGAGGTTGAGATCACTGAAGAGGCTTTTAAGCAGAGACAAGAGATTGTTAAGTCCTTGTAGTCCCAGTTCTATAGATGTGGAACAAGGCGGGAGAGGACAGAGCTAG 936 0.4658 MGDSYGSLSDSSAVEVTGKIMVVAIIILFFVVVFVLFLHLYAKWFWWRIEESTSPQPRSRRRRRFVFAPGQDPAIYGAQRSGLDPAVLRSLPVLVFQPEEFKDGLECAVCLSELVQGEKARILPECNHGFHVDCIDMWFQSHSTCPLCRSHVHSGYSKSSDSSDARENASENTESLVAENSAALSSSESPNFPTNVLIWGNQTQVSSVGASLEVEGPSPQPPCSSSSATTSSSSASTSSNRHHGILVIDIPSEINSSALSPSASRFPEDELKSPMTTRLRSLKRLLSRDKRLLSPCSPSSIDVEQGGRGQS 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00458 311 CDD RING-H2_EL5-like 106 149 - -
Bach6g00458 311 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 75 155 IPR013083 -
Bach6g00458 311 MobiDBLite consensus disorder prediction 209 240 - -
Bach6g00458 311 MobiDBLite consensus disorder prediction 169 189 - -
Bach6g00458 311 MobiDBLite consensus disorder prediction 156 189 - -
Bach6g00458 311 ProSiteProfiles Zinc finger RING-type profile. 107 149 IPR001841 -
Bach6g00458 311 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 15 270 - -
Bach6g00458 311 FunFam RING-H2 finger protein ATL3 76 154 - -
Bach6g00458 311 Pfam Ring finger domain 106 149 IPR001841 -
Bach6g00458 311 SMART ring_2 107 148 IPR001841 -
Bach6g00458 311 SUPERFAMILY RING/U-box 87 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00458 Bach-Chr6 3290584 3291519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00458 4 290 C3H Transcription Factor Family AT1G53820 44.839 2.20e-70 219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach6g00458 6 3290584 3291519 Bach6g00458 6 3290584 3291519 ECH