Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00454 ATGAGTATGATAAAGCAAGTCTTCGCCGGAATATCAAATTCCGGCGAGGATATTTCCTTGTCTAAAAAGAAAAAGAACCTCTTCTTAGCCCTGTTTGCCACTCTGTTTCTTCTTGTTGCCGTTGTCAGCATTGTCGCTGGAGTTAACTCCCACAAGAACTCCAACTCCGGCGACAATGATGTAGTCTCGGCCCAATCACATCCCAAAGGGCCTCACCAAGAGGGAAAAGTTGCTCTCCATGATTGCTTGGAGACCATTGATGAGACCCTTGACGAGCTTCATAAGACCAAGGATGATCTCAAACAGTACCCATCAAAGAAGTCTCTGTCCCAACACGCAGATGAGCTCAAGACCCTCATCAGTTCTGCCATAACCAACCAAGAGACTTGCTTGGATGGGTTTTCTCACGACAAGGCAGACAAGAAAGTGAGGAAAACTCTGGAGAAAGGGCTAGTGCATGTCGAGAAAATGTGCAGCAACGCATTGGCCATGATCAAGAACATGACTGATAACGACATTGCCAATTATGAGAAGAAGATGAAAATTACAAGCAGGAAGCTAGTGGAGCTTCAGGAAGAGGACCAAGATGGGATTAAGTGGCCGGAATGGATGTCGGCGGCAGACAGACGCCTTCTACAGTCGTCCACCGTGACGCCAGACGTTGTCGTGGCTGCAGATGGCAGTGGGAACTTTAGGACGGTGTCGGCTGCGGTGGCGGCTGCTCCTCAGGGGAGTAGCAGGAGATATGTTATTAAGATAAAAGCAGGTGTGTACAGAGAAAATGTGGACGTGACCAAGAAGAAGACTAATATTATGTTCTTTGGAGATGGAAGAACAACGACAATTATCACAGGAAGCAGAAATGTGGTTGATGGAAGCACAACCTTCAACTCTGCCACAGTTGCCGTAGTGGGAGAAAGATTCCTAGCACGAGACATAACGTTCCAAAACACAGCGGGTCCCTCAAAGCACCAAGCAGTGGCGCTCAGAGTTGGCGCTGATCTCTCCGCCTTCTACCGCTGTGACATTCTTGCTTACCAAGACTCACTTTATGTCCACAGCAATCGCCAATTCTTCGTGGGCTGTCTCATTGCCGGCACGGTGGATTTCATATTCGGCAATTCAGCCGTTGTTCTCCAAGACTGTGACATCCACGCTCGGCGTCCCAACTCTGGCCAAAAGGACATGGTGACGGCACAAGGGCGTGTTGATCCTAACCAGAACACTGGTATTGTGATTCAAAAGAGTAGAATTGGTGCCACTAGGGATTTGGAGCCTGTCAAGGGAAGCTTCCCTACCTACCTTGGGAGGCCATGGAAGGAGTACTCTAGGACTGTGATCATGCAAACAACTATAAGTGATGTGATTGTGGCAGCAGGGTGGCATGAGTGGACTGGCAATTTTGCATTGAACACTTTGTTTTATGGGGAATATCAGAACAGCGGACCTGGTGCTGATACCTCTGGGAGGGTCAAGTGGAGAGGGTTTAAGGTCATTACTAGTGCTACTGAGGCCCAAGCTTACACTCCTGCTAGGTTCATTGCAGCCTCTAGTTGGTTGGGCTCCACTGGCTTTCCCTTCACTGTTGGGCTCTAA 1596 0.4881 MSMIKQVFAGISNSGEDISLSKKKKNLFLALFATLFLLVAVVSIVAGVNSHKNSNSGDNDVVSAQSHPKGPHQEGKVALHDCLETIDETLDELHKTKDDLKQYPSKKSLSQHADELKTLISSAITNQETCLDGFSHDKADKKVRKTLEKGLVHVEKMCSNALAMIKNMTDNDIANYEKKMKITSRKLVELQEEDQDGIKWPEWMSAADRRLLQSSTVTPDVVVAADGSGNFRTVSAAVAAAPQGSSRRYVIKIKAGVYRENVDVTKKKTNIMFFGDGRTTTIITGSRNVVDGSTTFNSATVAVVGERFLARDITFQNTAGPSKHQAVALRVGADLSAFYRCDILAYQDSLYVHSNRQFFVGCLIAGTVDFIFGNSAVVLQDCDIHARRPNSGQKDMVTAQGRVDPNQNTGIVIQKSRIGATRDLEPVKGSFPTYLGRPWKEYSRTVIMQTTISDVIVAAGWHEWTGNFALNTLFYGEYQNSGPGADTSGRVKWRGFKVITSATEAQAYTPARFIAASSWLGSTGFPFTVGL 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00454 531 CDD PMEI-like_3 39 169 - -
Bach6g00454 531 Gene3D - 213 531 IPR012334 -
Bach6g00454 531 Pfam Pectinesterase 220 516 IPR000070 GO:0030599|GO:0042545
Bach6g00454 531 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 69 169 IPR035513 -
Bach6g00454 531 Pfam Plant invertase/pectin methylesterase inhibitor 65 164 IPR006501 GO:0004857
Bach6g00454 531 FunFam Pectinesterase 59 169 - -
Bach6g00454 531 PANTHER PECTINESTERASE 66 521 - -
Bach6g00454 531 Gene3D Invertase/pectin methylesterase inhibitor family protein 21 170 IPR035513 -
Bach6g00454 531 SMART PMEI_2 16 164 IPR006501 GO:0004857
Bach6g00454 531 NCBIfam pectinesterase inhibitor domain 58 168 IPR006501 GO:0004857
Bach6g00454 531 FunFam Pectinesterase 214 531 - -
Bach6g00454 531 SUPERFAMILY Pectin lyase-like 215 530 IPR011050 -
Bach6g00454 531 Coils Coil 173 193 - -
Bach6g00454 531 MobiDBLite consensus disorder prediction 53 75 - -
Bach6g00454 531 ProSitePatterns Pectinesterase signature 2. 364 373 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00454 Bach-Chr6 3265497 3269353 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00454 69 531 Carbohydrate Esterase AT3G14310 75.630 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00454 K01051 - qsa:O6P43_018475 757.673