Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00453 ATGGATTCCATCAACTCCTTCAAGGGATACGGTAAGGTAGATGAGCTGGAGCAGCAAGCATTCAAAAAGAAGACACGGAAGCGTATCGTCATTCTCATCGTCTCCTCCGTAGTACTTGTAGCTGTCATCATCGCTGCAATTGCAGGTGTCGTCATACATAAGCGCAATAGCTCATCGTCTTCAGATAATTCCGTCCCTTCGAGTGGCATAACTCCGGCAGCGTCGCTTAAAGCAGTCTGCGATGTCACTCAGTATCCCGATTCCTGCTATTCCAGCATCTCATCCCTCCCCAACTCCAACTCCACCGACCCAGAACTCCTCTTCAAGCTCTCTCTCCGCGTCGCCGTCAATGAGCTCTCCAAGCTCTCGCAGTACCCTTCTAAGATCAGAGACAAAGTGAAGGAACCCCGTCTTCAGAAGGCCATTGATGTTTGTGCGACCGTTCTCGATGATGCGCTGGATCGACTCAACGAGTCGGTTACGTCTCTGGAAACCGGCGGCGGCGGTGGTGAGAAACTCTTGTCGCAGGCGAAGATCGCCGACCTTAGGACCTGGCTCAGCGCCACTATTACCGACCAAGATACCTGTTTGGATGCTCTCGAGGAATTGAACTCCACTACAGGGAATGCAACTCTTCACGATGTGGGAACCGTCATGATCAACTCCACCCAGTTCGCGAGCAACAGTTTGGCCATTGCCACCAAGATTCTCGCTCTGCTTGAGACCTTCGACATTCCAATCCATCGGAGGCTACTCGGGTTCGGAGGCTCCGTATCCGGATTCCCGGACTGGGTTGGCCCGGATGAGAGGAGGCTGTTGCAGGAGAAGAAAACGACACCGGATTTGGTGGTGGCCAAGGACGGAACCGGGAAATTTAAGACGATCAAAGAGGCATTGGCGACGGTCCCGAAGAAGAGTAAGACGAGGCATGCAATTTACGTGAAGGAGGGAAAATATTTGGAGAACATAGATTTGGACAAGAACACATGGAATGTGATGATTTACGGAGACGGAAAGGACAAAACCATCGTCTCCGGCAGCTTGAACTTCGTCGACGGCACACCCACATTTGCCACTGCAACGTTTGCTGTGAAGGGGAAGGGATTCATTGCCAAGGACATAGCCTTCATAAACACTGCAGGTGCAGCTAAGCATCAGGCTGTGGCCTTCAGATCAGGCTCAGATATGTCTGTGTTCTATGGATGCTTATTCGATGGATTCCAGGACACACTCTATGCCCATTCCAACCGCCAATTCTACCGCGATTGCGACATTACAGGTACCATAGACTTTATATTTGGCAATGCAGCTGTTGTGTTCCAAAACTGCAACATTATGCCTAGGCAGCCCCTGCCAAACCAATTCAACACCATCACAGCTCAGGGTAAGAAAGATCCAAACCAGAACTCTGCTATATCAATCCAAAAGTGTAAAATCTCTCCACTAGATAAGCTTACTGCTCCAACATACCTCGGTAGGCCTTGGAAACCATATTCCACCACTGTTATTATGCAATCTGAAATTGGGTCACTTTTGAACCCATTGGGCTGGATGTCATGGATCCCCAATGTGGAACCGGCCAATACCATAGTTTATGCAGAATATCAGAACACTGGGCCTGGATCAGATGTGACGAAACGGGTTAGATGGGCCGGTTATAAGCCTACTCTCACAGATGGTGAGGCAGGGAAGTTCACTGTGGAATCCTTAATCCGAGGAAGTGAATGGTTATCCTTTGCAGATTCTAGTATGCAGTATGACTCACACTTATGA 1773 0.4952 MDSINSFKGYGKVDELEQQAFKKKTRKRIVILIVSSVVLVAVIIAAIAGVVIHKRNSSSSSDNSVPSSGITPAASLKAVCDVTQYPDSCYSSISSLPNSNSTDPELLFKLSLRVAVNELSKLSQYPSKIRDKVKEPRLQKAIDVCATVLDDALDRLNESVTSLETGGGGGEKLLSQAKIADLRTWLSATITDQDTCLDALEELNSTTGNATLHDVGTVMINSTQFASNSLAIATKILALLETFDIPIHRRLLGFGGSVSGFPDWVGPDERRLLQEKKTTPDLVVAKDGTGKFKTIKEALATVPKKSKTRHAIYVKEGKYLENIDLDKNTWNVMIYGDGKDKTIVSGSLNFVDGTPTFATATFAVKGKGFIAKDIAFINTAGAAKHQAVAFRSGSDMSVFYGCLFDGFQDTLYAHSNRQFYRDCDITGTIDFIFGNAAVVFQNCNIMPRQPLPNQFNTITAQGKKDPNQNSAISIQKCKISPLDKLTAPTYLGRPWKPYSTTVIMQSEIGSLLNPLGWMSWIPNVEPANTIVYAEYQNTGPGSDVTKRVRWAGYKPTLTDGEAGKFTVESLIRGSEWLSFADSSMQYDSHL 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00453 590 NCBIfam pectinesterase inhibitor domain 69 232 IPR006501 GO:0004857
Bach6g00453 590 SUPERFAMILY Pectin lyase-like 280 580 IPR011050 -
Bach6g00453 590 Pfam Pectinesterase 281 573 IPR000070 GO:0030599|GO:0042545
Bach6g00453 590 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 76 236 IPR035513 -
Bach6g00453 590 FunFam Pectinesterase 275 588 - -
Bach6g00453 590 Gene3D Invertase/pectin methylesterase inhibitor family protein 74 237 IPR035513 -
Bach6g00453 590 ProSitePatterns Pectinesterase signature 2. 425 434 IPR033131 -
Bach6g00453 590 SMART PMEI_2 71 232 IPR006501 GO:0004857
Bach6g00453 590 CDD PMEI-like_3 78 236 - -
Bach6g00453 590 PANTHER PECTINESTERASE 35 578 - -
Bach6g00453 590 Pfam Plant invertase/pectin methylesterase inhibitor 76 232 IPR006501 GO:0004857
Bach6g00453 590 Gene3D - 275 587 IPR012334 -
Bach6g00453 590 FunFam Pectinesterase 72 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00453 Bach-Chr6 3259998 3262876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00453 1 577 Carbohydrate Esterase AT1G53840 60.000 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00453 - - qsa:O6P43_018474 814.298