Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00443 ATGATGGCAACTTCCTCAGCCTCTGCTGACGCTCTCTCTGTTGATGAGTTCTACTTTTCAGCCCTTTGTGATAGTGAAGTGTTGTTTCCGATCTCTGATGAGATTTATGCAGAAGAGCTACAGCTCCAAGAGGCTCTAATTTCCTCGGCTCTGTCCACTAAAAGGAAACGCGAAGTCACCCAAGTGGATGTAGAATGTGACACACACCCTTTTAAGGGGAAGCAGAAAGAGACTGGTGAGTCTTCTCAATCTTGTTCTCAAAGCTTCTGTAAGATATGTACGGAAGATAAACCAGCTGAAGAAATGTTCAGAAACCAGAACTGCAGTCACTCATTCTGCACTGATTGTATTGGAAGATACGTGGGACCAAAGATTCAGGAAAACATCATCTGTTTCAAGTGTCCTGAACCAAAATGTGAGGGTGTCCTAGAGCCTCAGTTCTGTCGTTCAATTATCCCAAAGGAGGTGCTTGATCGATGGGAGGATGCTCTCTCTGAGAATTTGGTACTAGGATCACAGAAATTTTACTGTCCTTTTAAGGATTGCTCAGCTTTATTACTGGACGATGGAAATGAAGTTGTGACTTCTTCAGAGTGTCCAAATTGTAGGAGGTTGTTCTGTGCACAATGTAGGGTGCCATGGCATGCAGAACTTGATTGTGGGGAGTTTCAGGACTTGAAAAAGAGTGGTCATGAGAGAGAAGATTTAATGGTAATGGAGCTAGCAAAGGATAAGAAATGGAGAAGATGCCCCACCTGCAAATTTTATGTGGAAAAAGTTGATGGATGCTTGCACATTTCTTGCAGGTGTGGCTGCCAGTTTTGTTATGGTTGTGGATCCATCTATGATAACCATCATGCTTGTCGAAATGTTTAAGGATGTCAGAGGAATAATAAAGCAGAACGTATCAACTTGTAAGATTCATATATAAGCTTATATAGTATTTTTAAGCACTGCCAGACAAATTTACTATGAATGTGAATTTGTTGAACTATATATCTGTTAAGTTGATATTGTTATTTGAGGTTTTAAGGTTATTGAAT 1043 0.4046 MMATSSASADALSVDEFYFSALCDSEVLFPISDEIYAEELQLQEALISSALSTKRKREVTQVDVECDTHPFKGKQKETGESSQSCSQSFCKICTEDKPAEEMFRNQNCSHSFCTDCIGRYVGPKIQENIICFKCPEPKCEGVLEPQFCRSIIPKEVLDRWEDALSENLVLGSQKFYCPFKDCSALLLDDGNEVVTSSECPNCRRLFCAQCRVPWHAELDCGEFQDLKKSGHEREDLMVMELAKDKKWRRCPTCKFYVEKVDGCLHISCRCGCQFCYGCGSIYDNHHACRNV 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00443 291 Gene3D - 217 291 - -
Bach6g00443 291 SUPERFAMILY RING/U-box 234 289 - -
Bach6g00443 291 Pfam IBR domain, a half RING-finger domain 163 220 IPR002867 GO:0008270
Bach6g00443 291 Pfam IBR domain, a half RING-finger domain 241 288 IPR002867 GO:0008270
Bach6g00443 291 SMART ibrneu5 158 220 IPR002867 GO:0008270
Bach6g00443 291 SMART ibrneu5 232 288 IPR002867 GO:0008270
Bach6g00443 291 CDD Rcat_RBR_unk 246 282 - -
Bach6g00443 291 ProSitePatterns Zinc finger RING-type signature. 108 117 IPR017907 -
Bach6g00443 291 ProSiteProfiles Zinc finger RING-type profile. 90 134 IPR001841 -
Bach6g00443 291 SUPERFAMILY RING/U-box 164 225 - -
Bach6g00443 291 CDD BRcat_RBR_unk 171 223 - -
Bach6g00443 291 FunFam RBR-type E3 ubiquitin transferase 85 171 - -
Bach6g00443 291 SUPERFAMILY RING/U-box 87 167 - -
Bach6g00443 291 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 59 281 IPR031127 GO:0004842|GO:0016567
Bach6g00443 291 ProSiteProfiles TRIAD supradomain profile. 86 291 IPR044066 -
Bach6g00443 291 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 83 170 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00443 Bach-Chr6 3206405 3207572 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00443 90 280 C3H Transcription Factor Family AT2G19610 28.293 4.31e-20 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00443 K11975 - qsa:O6P43_018461 422.55