Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00440 CATTACCCATTTCCATTGAAGTGAAATAAAGTCTCAAACTTTTCTCTCAAAAATCTTTTTCCGAGCCTTTTGCATCGAGAAACTCAAGGGATCTGAAGCAGGTTAGTGAAGCATGTGTGGAGGTGCTATTATCTCCGACTTCATTCCGGCGACGCCGGTGAGGTCTCGCCGTCTCACCGCCGATTACCTCTGGCCGGATTTGAAGAAAACCAGTTCAAGGAGGCGCTTCTCGAAGCCCCTCAGGTCTGAGATTGTGGATTTGGACGATGATTTTGAAGCTGATTTTAAGGAATTTAAGGACGATTCTGATATTGATATTGATGATGATGAGGATTTGATGGTCGATGTCAAGCCCTTCGCTTTCTCAGCTACCAAGCCTTCCAAGGCCTCTAAGGCTGCTCTTTCTTGTGGATCTACAACTGTTAAATCCACTGAACTCAGTGGGCAAGCTGCAAAATCTGCAAAGAAAAAGAGGAAGAATCAGTATAGGGGAATCCGGCAGCGTCCATGGGGTAAATGGGCAGCTGAGATCCGTGACCCCAGGAAGGGGGTTCGTGTCTGGCTTGGAACCTTCAACACAGCTGAAGAAGCTGCAAGAGCTTATGATGCTGAAGCACGGAGGATTCGTGGGAAGAAAGCCAAGGTGAATTTCCCTGATGATGCTCCAGGCGCTTCCCCAAAACGTTTTAAGGCAAATCCTGAGAAACAGAACTCTGTTCATTCCATTGTTGAGCAGAAATTTAATGCTGTTAACAACTATGAGGACTACTACAGTCTTGTCGAAGAGAAACCAATGGTTAATCAGTATGCTAACATGGCCCCCTTCCCCGCGAATGGAGATGGACTTACATCCCTTGCGCCATCGGAAGATGTTACTTTCTATTTCAGTTCTGATCAGGCGAGTAACTCGTTTGATCATTCAGACCTTGCATGGGCCGAACAGGGCTCCAAGACTCCTGAAATCTCATCCATGCTTTCTTCTCCCATGGAGGATGAATCTCAGTTTGTGCAGTGTGCAAGCCCCAAGAACCTGCAATCTAACTCTGAACAAGACAATTCTGGAAAGACACTATCTGAGGAGCTTGCTGACATTGAATCCCAGTTGAAGTACTTTCAGGCACCTTATCTTGAAGGAAGCTGGGATGATGCTTCATTGGAGACCTTTCTCACTGGAGATGCTACTCAGGATGGTGGAAACCCAATGAACCTTTGGAGCTTTGATGACCTGTCTTCCATGGTTGGAGGAGTTTTCTAAACTCCGTCTGCTTGTTTGTGTAAATAAAGCGACAAGAATAATTGTTACCTGGTGTTGGCGATGAAGTAAAACCGCTTAAGCTTGTAACGAGGTTATTCTCTGCTAGCTATTCATGTATGGGACTCTAGTATTTTCGGTGTCCTTTTACCTTTTTCGTAAGACCTTGGTTTTGGAGATTTTTTTTTAAGTTTTCGATGTTTATAA 1459 0.4496 MCGGAIISDFIPATPVRSRRLTADYLWPDLKKTSSRRRFSKPLRSEIVDLDDDFEADFKEFKDDSDIDIDDDEDLMVDVKPFAFSATKPSKASKAALSCGSTTVKSTELSGQAAKSAKKKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGKKAKVNFPDDAPGASPKRFKANPEKQNSVHSIVEQKFNAVNNYEDYYSLVEEKPMVNQYANMAPFPANGDGLTSLAPSEDVTFYFSSDQASNSFDHSDLAWAEQGSKTPEISSMLSSPMEDESQFVQCASPKNLQSNSEQDNSGKTLSEELADIESQLKYFQAPYLEGSWDDASLETFLTGDATQDGGNPMNLWSFDDLSSMVGGVF 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00440 380 SMART rav1_2 124 187 IPR001471 GO:0003700|GO:0006355
Bach6g00440 380 Gene3D AP2/ERF domain 123 182 IPR036955 GO:0003700|GO:0006355
Bach6g00440 380 CDD AP2 124 183 IPR001471 GO:0003700|GO:0006355
Bach6g00440 380 FunFam Ethylene-responsive transcription factor 2 123 182 - -
Bach6g00440 380 ProSiteProfiles AP2/ERF domain profile. 124 181 IPR001471 GO:0003700|GO:0006355
Bach6g00440 380 Pfam AP2 domain 124 173 IPR001471 GO:0003700|GO:0006355
Bach6g00440 380 PRINTS Ethylene responsive element binding protein signature 147 163 IPR001471 GO:0003700|GO:0006355
Bach6g00440 380 PRINTS Ethylene responsive element binding protein signature 125 136 IPR001471 GO:0003700|GO:0006355
Bach6g00440 380 PANTHER DNA-BINDING DOMAIN 96 300 IPR044808 GO:0003700|GO:0009873
Bach6g00440 380 MobiDBLite consensus disorder prediction 178 201 - -
Bach6g00440 380 SUPERFAMILY DNA-binding domain 124 182 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00440 Bach-Chr6 3183490 3185982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00440 1 380 AP2-EREBP Transcription Factor Family AT3G14230 47.561 3.23e-77 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach6g00440 AP2 1.9e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00440 K09286 - zju:107435298 409.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach6g00440 6 3183490 3185982 Bach6g00440 6 3183490 3185982 ECH