Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00396 ATGTTCGCTGGAAAGCAGCTAGAAGATGGCCGCACTCTCGCGGATTACAATATCCAAAAGGAATCGACCCTTCATTTGGTGCTTCGGTTAAGGGGTGCCAAGATACAGGACAAGGAAGGTATCCCTCCTGATCAGCAGAGACTTATCTTTGCTGGGAAGCAACTGGAAGATGGGCGTACCCTTACTGACTACAACATTCAAAAGGAATCCACTTTGCACTTGGTTTTGCGACTTCGTGGTGGAAGGCAGATTTGTGTCAAGACCCTGACTGATCAGCAGAGGCTAATTTTTGCCCGGAAGCAATTGGAAGATGGCCGTACCTTGTCTGATTACAATATCCAAAAGGAGTCTACTCTCCATGTTGTTCTTCGCCTCCGTGGTGGATTTTAA 390 0.4718 MFAGKQLEDGRTLADYNIQKESTLHLVLRLRGAKIQDKEGIPPDQQRLIFAGKQLEDGRTLTDYNIQKESTLHLVLRLRGGRQICVKTLTDQQRLIFARKQLEDGRTLSDYNIQKESTLHVVLRLRGGF 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00396 129 SMART ubq_7 11 77 IPR000626 GO:0005515
Bach6g00396 129 SMART ubq_7 82 124 IPR000626 GO:0005515
Bach6g00396 129 ProSiteProfiles Ubiquitin domain profile. 1 33 IPR000626 GO:0005515
Bach6g00396 129 FunFam Polyubiquitin-C 32 81 - -
Bach6g00396 129 SUPERFAMILY Ubiquitin-like 89 128 IPR029071 -
Bach6g00396 129 ProSiteProfiles Ubiquitin domain profile. 91 128 IPR000626 GO:0005515
Bach6g00396 129 Gene3D - 33 85 - -
Bach6g00396 129 Gene3D - 1 32 - -
Bach6g00396 129 Gene3D - 86 128 - -
Bach6g00396 129 PRINTS Ubiquitin signature 37 57 IPR019956 -
Bach6g00396 129 PRINTS Ubiquitin signature 58 79 IPR019956 -
Bach6g00396 129 ProSiteProfiles Ubiquitin domain profile. 34 81 IPR000626 GO:0005515
Bach6g00396 129 SUPERFAMILY Ubiquitin-like 34 82 IPR029071 -
Bach6g00396 129 SUPERFAMILY Ubiquitin-like 1 33 IPR029071 -
Bach6g00396 129 PANTHER UBIQUITIN 90 128 - -
Bach6g00396 129 Pfam Ubiquitin family 1 31 IPR000626 GO:0005515
Bach6g00396 129 Pfam Ubiquitin family 33 79 IPR000626 GO:0005515
Bach6g00396 129 Pfam Ubiquitin family 88 126 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00396 Bach-Chr6 2825917 2826470 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00396 1 36 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 88.889 3.60e-16 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00396 - K08770 dfa:DFA_11090 216.853