Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00394 ATGCAACCATGCAGTGTGTTATTAGATGACCAAACCATGATGCACTTTTGGGTTCCCAGAAATAGGCAACTCGACAAGCCAAACGTAGCCTTAATCCATGGTTATGGGGGGAATTCACGGTGGCAGTTCTTCCGCCAAGTTGGACCGCTATCACGGCGTTTCAACTTGTACATACCAGACCTCTTGTTCTTTGGTAAGTCTATTACGAATCGGACGGACCGGTCCGACAGGTTTCAGGCTAAGTGTGTTGGAGAGGGGATGAAGACATTGGGTGTGGACAGGTTCAGTGTTGCTGGGATCAGCTACGGAGGATATGTGGCATATCGAATGGCTGAGATTTACCAGAAGGAGGTGGAGAAGGTTGTGATTGTGAGCAGTGGAATATGTTACACAGATGATCAGAAGGCAGAGGAACTGAGAAGGATAGGAAGGAATCCATTGGAATTGCTTCTCCCAGAGAACCCAAAAGATCTAAGGTCACTAATGAACATTAGCTTATATAAGTACAATCCAATCAAGTGGGTACCAAATATTTTCTTGAGGGAGTCCATAAAAGTGATGTTTGAGAAGAATAGGAAGGAGATGTTGGAGATTGGAGAGTACTTGCTGAGCAAACCAGCAGATTCCAATCTTGGGATTTTGAGTCAGGTAGCCCTATCATTTGACGGCGCCGTTTTGGGGGTGGCACTAGCCTACATCGCCGTCCGTTCTGTCCTCAAATTCACATTCAACTCCACCGCTCTCGGTAAGCTCCGCAAAGCCCCTTCCTTCTCTGTTTCGGACCTTCGATCACTCCTCGGTAATTCCGAAACTGAAGGCAATTCCGAAAATTCTGAACTTGTGATTGTCCGGGGTACTGTCGAGGCCAAGTCCGTGGTCGATAGCAGCTGGAAGAGTTTCAGGCCTAGCATCTTGGTTTCTCGGGAGTCAGGCGACAAGGCTGTGGTGATTCAAAGAACTCAAACGTGTGTATATAATGAATGGAAGGGCTTCTTTGGATGGACTTCTGATCTTCGAGCCATATTTTCAAAATCTTGGAGGCAACAAGAATCTACGTCATTCAGAACGGTGCCTTTTGTTCTAATTGATGGTAGACTATGGACACATGCAGATTATGTTGTTGTCAACTTGGACGGCTCAAGACATCCCTTACCCCTTACAACAGTTTATCATAAATTGCAACCGATAAATGCTTCTCCTTACACATTCTTGCAGGCACTGTTTGGTCATGAATATCCAGTTGGACTGCTGGATGAAGAAAAAATTCTGCCTTTAGGAAAGGAAATCAATGCTGTGGGCCTTTGCAGTTTTAGAGATGGAATAGCTGAGATTAAATCAAGCAAAGATATACCATATTTTTTGACTGACATGAGTAAAGATCAGATGATTGTAGATCTTGCCTTCAAAACGAATATACTGTTTTGGGCTGGTATTCTCTTTGGTTCAATGTCAGTTGCCGTTCTTGGTTATGCTGCTGTGAGGAACTGGAATAAGTGGAAAGAGTGGAGGCAGCTCCGGCAACGAAACCAAGATGTCAGTAATAATACTGATTCTCAGACTGCAGTTGATGATGATCCAGAAGAGGTTCCTGATGGACAATTATGCATTATATGCCTCATGAGGAGAAGGCGCTCTGTTTTTATTCCCTGTGGACATCTTGTGTGCTGCCAACGGTGTGCCATATCGGTTGAACATGAAGCGATCCCTAAATGTCCCCTTTGTAGACAGGAAATCCGGAATTCAGTGCGGATTTTTGAATCTTGAGTTGACAGAGGTTGATTTTATGGTAAACTGCAGCAGGAGTCTTTCATACTTGTTGAATCAGCTGTGTTGGGCTGGTTAGCAGAACGGTTACTTTCTTCTTTCTCTAAAGAATGTTTCTAGAGTTTATGGATACCATGCCTTGTCCGATCTTTCCCCACGTATATGCGAATACATCTGTATGTACATTTTCCAATGTGGCTTTACTAGGTTGGAAGAGGCATAATTGTGACCCACCTCCCAAAAAAAATAAAAATAAAAATCCAAGTCTCCTTCGATGGGTC 2045 0.4401 MQPCSVLLDDQTMMHFWVPRNRQLDKPNVALIHGYGGNSRWQFFRQVGPLSRRFNLYIPDLLFFGKSITNRTDRSDRFQAKCVGEGMKTLGVDRFSVAGISYGGYVAYRMAEIYQKEVEKVVIVSSGICYTDDQKAEELRRIGRNPLELLLPENPKDLRSLMNISLYKYNPIKWVPNIFLRESIKVMFEKNRKEMLEIGEYLLSKPADSNLGILSQVALSFDGAVLGVALAYIAVRSVLKFTFNSTALGKLRKAPSFSVSDLRSLLGNSETEGNSENSELVIVRGTVEAKSVVDSSWKSFRPSILVSRESGDKAVVIQRTQTCVYNEWKGFFGWTSDLRAIFSKSWRQQESTSFRTVPFVLIDGRLWTHADYVVVNLDGSRHPLPLTTVYHKLQPINASPYTFLQALFGHEYPVGLLDEEKILPLGKEINAVGLCSFRDGIAEIKSSKDIPYFLTDMSKDQMIVDLAFKTNILFWAGILFGSMSVAVLGYAAVRNWNKWKEWRQLRQRNQDVSNNTDSQTAVDDDPEEVPDGQLCIICLMRRRRSVFIPCGHLVCCQRCAISVEHEAIPKCPLCRQEIRNSVRIFES 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00394 587 Gene3D alpha/beta hydrolase 14 208 IPR029058 -
Bach6g00394 587 Pfam alpha/beta hydrolase fold 29 130 IPR000073 -
Bach6g00394 587 Pfam Zinc finger, C3HC4 type (RING finger) 533 580 - -
Bach6g00394 587 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 518 587 IPR013083 -
Bach6g00394 587 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SPL2 209 587 IPR044247 GO:0004842
Bach6g00394 587 SMART ring_2 535 574 IPR001841 -
Bach6g00394 587 Pfam E3 Ubiquitin ligase 341 488 IPR022170 GO:0004842|GO:0006996|GO:0016567
Bach6g00394 587 CDD RING-HC_SPL2-like 530 576 - -
Bach6g00394 587 SUPERFAMILY RING/U-box 519 581 - -
Bach6g00394 587 ProSiteProfiles Zinc finger RING-type profile. 535 575 IPR001841 -
Bach6g00394 587 SUPERFAMILY alpha/beta-Hydrolases 10 169 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00394 Bach-Chr6 2818723 2823381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00394 527 584 C3H Transcription Factor Family AT3G06140 34.483 9.38e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00394 K15688 - qsa:O6P43_027545 587.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach6g00394 6 2818723 2823381 Bach6g00394 6 2818723 2823381 ECH