Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00390 ATGGCTTATGTGAGTGATGAGCGTACTAAAAGACAAGAGAAGCCAATTGAAGCCATGACAAGCGTTTCTCTTAGCAGGGGAACTTGGACACCAGAAGAAGATAGGAAACTGGCTGAGGTTATTGCAGTTCATGGAGCTAAAAGGTGGAAATCCATTGCAGCTAAAGCAGGTCTTAATAGGTGTGGTAAGAGTTGCAGGCTAAGGTGGTTGAATTATCTGAGACCCAATATCAAGAGGGGCAACATATCTGACCAAGAAGAGGATTTGATACTTAGGCTTCATAAGCTCCTTGGAAACAGGTGGTCTTTGATTGCCGGAAGGTTACCAGGTCGAACAGATAATGAGATAAAGAACTACTGGAATTCTCATTTGAGCAAGAAAATAAAGCAGAGAGAGAAACAAATTGAGAGCCCAACAAGAGAAGGGAGCACATCCCCGAAGAAAAATGAGGTACAGGAGACTCCTGCTGAGCTAATTAGAGAAGAGAATTCAACTGAAGGAATTGAAGACTCAGAGTTAAACTTTGATGTGAATGACTTCTTTGATTTCTCTGAAGAAAGTCAACTGAATATGGAATGGGTTAGCAGATTCCTTCAAGTAGATGAAGGTCTAAGTGGAATCTCTCACTGAAAATTGCTCTATATTTGTATGGTG 654 0.4113 MAYVSDERTKRQEKPIEAMTSVSLSRGTWTPEEDRKLAEVIAVHGAKRWKSIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKIKQREKQIESPTREGSTSPKKNEVQETPAELIREENSTEGIEDSELNFDVNDFFDFSEESQLNMEWVSRFLQVDEGLSGISH 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00390 209 CDD SANT 28 73 IPR001005 -
Bach6g00390 209 CDD SANT 83 124 IPR001005 -
Bach6g00390 209 MobiDBLite consensus disorder prediction 153 167 - -
Bach6g00390 209 FunFam MYB-related transcription factor 25 78 - -
Bach6g00390 209 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 77 IPR017930 -
Bach6g00390 209 Gene3D - 26 78 - -
Bach6g00390 209 SMART sant 78 126 IPR001005 -
Bach6g00390 209 SMART sant 25 75 IPR001005 -
Bach6g00390 209 SUPERFAMILY Homeodomain-like 23 120 IPR009057 -
Bach6g00390 209 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 78 128 IPR017930 -
Bach6g00390 209 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 20 161 - -
Bach6g00390 209 ProSiteProfiles Myb-like domain profile. 21 73 IPR001005 -
Bach6g00390 209 ProSiteProfiles Myb-like domain profile. 74 124 IPR001005 -
Bach6g00390 209 MobiDBLite consensus disorder prediction 129 171 - -
Bach6g00390 209 Pfam Myb-like DNA-binding domain 26 73 IPR001005 -
Bach6g00390 209 Pfam Myb-like DNA-binding domain 79 124 IPR001005 -
Bach6g00390 209 Gene3D - 82 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00390 Bach-Chr6 2795728 2796596 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00390 26 177 MYB Transcription Factor Family AT5G40330 53.289 7.84e-54 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach6g00390 Myb_DNA-binding 1e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00390 K09422 - cave:132188282 304.293