Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00387 ATATATATATGTATATCTAGGATCTTTCTTACTCTCACTCTCTCTTACGTAAGATAGCTAGAAAGAAGCTGCATAGAGAGAGAGAGAGATCAGATGGGTCGGAGTCCATGTTGTTCTAAAGAAGGTTTGAACAGAGGAGCATGGACAGCTACAGAAGACAAAACTCTCACAGAATACATTAAGATTCATGGTGAAGGGAAATGGAGACACCTACCTAAAAAAGCAGGTCTTAAGAGATGTGGGAAGAGTTGCAGGTTGAGATGGTTAAATTATCTGAGACCTGATATTAAAAGAGGAAATATTACTCCTGACGAAGAGGAACTCATTATCAGGCTTCACAACCTTCTTGGAAACAGGTGGTCTTTGATAGCTGGACGGCTCCCAGGCCGAACAGACAATGAAATCAAGAACTACTGGAACACCAATATCGGAAAGAAAATTCAAAATGGCAACCCAAACTCTTCCACTTCACCTAATACATCAAATTCACCTCAACATAATACAAACCCGAAAACCCAAAAGCAGAATCCGAACCCGCCCAATATGGGTTCATGCGTGTTCCGGACCAAGGCAACAAGGTGCACCAAGGTAATACTGACCCAAGAACCTCAACAAGTACTCGGGCCACCCTCCATGACCATGACCCATGAGAATGGCAACGATAACAAGATGGAGGCCGGAGTGGGAGTGGGATCAGAGCTGTTGCCTTCAACTCCACCATTTGATTCAGAAGAAGGGAATTGCAACCCATTGGATTTCATGGGGGATTTTGAGATGGATCAGAGCTTCTTTTCGGATCTTCTTAAGATGGATTTTCCAGAACCATCTTGCCTTGAAAATAACATGCAAGACAAAAACATTATCGCAAGTGACAAAAGTCAATCCTCTCCAAAGTCTAACGACGTTGACACTCTCACTCCTTTGCTTTCGGAAGATTCCTATCGTGGTGCAGGCTTTCAATCAATGGCAACTCTAGGGGACTCATCCGAATTTGACTGGCTTTGA 1005 0.4328 MGRSPCCSKEGLNRGAWTATEDKTLTEYIKIHGEGKWRHLPKKAGLKRCGKSCRLRWLNYLRPDIKRGNITPDEEELIIRLHNLLGNRWSLIAGRLPGRTDNEIKNYWNTNIGKKIQNGNPNSSTSPNTSNSPQHNTNPKTQKQNPNPPNMGSCVFRTKATRCTKVILTQEPQQVLGPPSMTMTHENGNDNKMEAGVGVGSELLPSTPPFDSEEGNCNPLDFMGDFEMDQSFFSDLLKMDFPEPSCLENNMQDKNIIASDKSQSSPKSNDVDTLTPLLSEDSYRGAGFQSMATLGDSSEFDWL 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00387 303 Gene3D - 14 66 - -
Bach6g00387 303 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 180 - -
Bach6g00387 303 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bach6g00387 303 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bach6g00387 303 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Bach6g00387 303 CDD SANT 16 61 IPR001005 -
Bach6g00387 303 FunFam Transcription factor TT2 70 144 - -
Bach6g00387 303 MobiDBLite consensus disorder prediction 112 155 - -
Bach6g00387 303 FunFam MYB-related transcription factor 13 66 - -
Bach6g00387 303 MobiDBLite consensus disorder prediction 112 154 - -
Bach6g00387 303 Gene3D - 71 145 - -
Bach6g00387 303 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bach6g00387 303 SMART sant 66 114 IPR001005 -
Bach6g00387 303 SMART sant 13 63 IPR001005 -
Bach6g00387 303 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Bach6g00387 303 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bach6g00387 303 CDD SANT 71 112 IPR001005 -
Bach6g00387 303 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00387 Bach-Chr6 2782672 2784510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00387 1 139 MYB Transcription Factor Family AT4G38620 66.429 1.08e-62 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach6g00387 Myb_DNA-binding 1.1e-13 CL0123