LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach6g00359	ATGGCTCTCTCACGGACGCCATCAAATTTAGAAGATGGTCCTGTCGGTCCCGTCGTGATCGCCATTGATAAAGACAGGAATAGCCAATTAGCTGTCAAATGGGCCGTTGAACACCTTTTGAAGAAGAATTCTTCATGCACACTTATTCACGTTCAGACCAAGAGCTTGCATCCCCTTTATGCAGATGACAATGCTATCCCGAAAGAAGGTCGTCCACCTACCGAAGAAGAACTGCACCAATTTTTTCTTCCCTTCCGAGGATTTTGTGCTCGAAAAGGGATCGAAGCAAAGGAGTTGGTCCTCCATGACAATCAGGTGTCGAGTGCACTTACTGATTATGTCATTAACAACTCTGTCACCAATATTGTTGTTGGTTCATCCAACCGGAATGTTATTACAAGGAAATTTAAAGATGCAGATGTACCTACTAACTTAGTCAAGTCCTTGCCACAGTCTTGCATAATACATGTTATATCAAAAGGAAAAGTACAGAATATACGACCAACAGGTCGTCCTCAAAATGTTAGCCTCTCAGCAACTGGATCTATAAAAATCATAGCCACTGCTAAGGGAGATCCTCCAGATACTCCAGTGTCTGAAGAGAAAAGAAGAAATCTGAGCATTGATGGAAATTTTAGTAGCTCAGGCTCCTCATCACAGAGTTCATCAAGTCAGAGTTCCCTTTCATCCCACAGTGACCATTCAAGACATAGTAGTTGTCCTTCGATTGGTCCATTCGATGAAAACCTAGAAGTACCCTTGAACTCAGATAGTCCCAAGAACAGCTCTCCTTCCAAAACCTCAAAACGGTTGGAGGTCGAGATGAGGAGATTAAAACTAGAACTTGAGAAAACAATGAAGAAATATAGTTCAGCCTGCAGGGAAGCTATTGCAGCAAGACAGAAGGTAATGGAGCTTGAACAGAATCGGGAAGAAGAAGAGCGCAACTTAGAAAAAGCCAGGCAAGCTGAAGAGGCTGCATTGGCTTTGGCAGAGGTGGAAAGGCAGAAAAGGAAGGCTGCTTTGGAATCGGCACTAATGGCAGAACGCCTGGCTAAAATGGAGAACCAGAAGAGAAAGGATGCTGAAATGAGAGCCAAGCATGAGGAAGAAGAGAAGAAAAGAGCATTAAGTGCACTAGTATATAATAAGATTCCATGTAGAAAATACGATATTCAAGAAATTGAAGTTGCAACACATTACTTTGACGATGCTCAGAAAATTGGTGAAGGTGGATATGGACCTGTTTATTGCGGGATGCTCGATCACACTGCTGTTGCCATTAAGGTTTTGAGACCAGATTTGGCCCATGGGGAGAGGCAATTCCAACAAGAGGTTGAGGTTTTGAGCACCATAAGACATCCAAACATGGTTCTTCTTGTAGGTGCCTGCCCAGAGTTTGGATGCCTTGTGTACGAGTACTTGGAAAATGGCAGCTTAGAAGACCGTCTCTACCGGAAAGATAACACTCCATCCCTTTCATGGCAAACTAGGTTCAGAATAGCAGCTGAAATTGCCACTGGCCTTCTTTTCCTCCACCAGACAAAACCGGAGCCATTGGTGCACCGGGACCTCAAGCCCGCAAACATACTCTTAGACCGGAACTATGTGAGCAAGATCGGAGATGTAGGTTTGGCCAGGCTTGTGCCCCCAAAGGTAGCTGACAGAACTACTCAATACCACATGACAGCAGCAGCCGGTACATTTTGCTATATTGACCCAGAGTATCAACAAACAGGATTGCTGGGTGTAAAATCAGATATATATTCATTAGGCGTATTGCTGCTACAAATTATTACTGGAAAGCCTCCTATGGGTCTGTCCCACCTGGTTGAGAAGGCTATTGAAAAAGGTAAATTTCCACAGGTGCTTGATCGCAGTGTGCCGGATTGGCCTGTTGAAGAGGCTTTCTCATTTGCTAAATTGGCTTTGAAGTGTTGTGAGTTGAGGAAACGTGACAGACCAGATCTTGGTACTGTTATTTTGCCGGAGCTGAATCGACTTCAGAAAGCTGGGAGAAGTTAA	2025	0.4415	MALSRTPSNLEDGPVGPVVIAIDKDRNSQLAVKWAVEHLLKKNSSCTLIHVQTKSLHPLYADDNAIPKEGRPPTEEELHQFFLPFRGFCARKGIEAKELVLHDNQVSSALTDYVINNSVTNIVVGSSNRNVITRKFKDADVPTNLVKSLPQSCIIHVISKGKVQNIRPTGRPQNVSLSATGSIKIIATAKGDPPDTPVSEEKRRNLSIDGNFSSSGSSSQSSSSQSSLSSHSDHSRHSSCPSIGPFDENLEVPLNSDSPKNSSPSKTSKRLEVEMRRLKLELEKTMKKYSSACREAIAARQKVMELEQNREEEERNLEKARQAEEAALALAEVERQKRKAALESALMAERLAKMENQKRKDAEMRAKHEEEEKKRALSALVYNKIPCRKYDIQEIEVATHYFDDAQKIGEGGYGPVYCGMLDHTAVAIKVLRPDLAHGERQFQQEVEVLSTIRHPNMVLLVGACPEFGCLVYEYLENGSLEDRLYRKDNTPSLSWQTRFRIAAEIATGLLFLHQTKPEPLVHRDLKPANILLDRNYVSKIGDVGLARLVPPKVADRTTQYHMTAAAGTFCYIDPEYQQTGLLGVKSDIYSLGVLLLQIITGKPPMGLSHLVEKAIEKGKFPQVLDRSVPDWPVEEAFSFAKLALKCCELRKRDRPDLGTVILPELNRLQKAGRS	674

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach6g00359	674	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	520	532	IPR008271	GO:0004672\|GO:0006468
	Bach6g00359	674	FunFam	U-box domain-containing protein 51	475	674	-	-
	Bach6g00359	674	SMART	serkin_6	402	665	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach6g00359	674	Gene3D	Phosphorylase Kinase; domain 1	381	474	-	-
	Bach6g00359	674	Coils	Coil	351	379	-	-
	Bach6g00359	674	Pfam	Protein kinase domain	403	656	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach6g00359	674	MobiDBLite	consensus disorder prediction	208	239	-	-
	Bach6g00359	674	SUPERFAMILY	Protein kinase-like (PK-like)	382	660	IPR011009	-
	Bach6g00359	674	CDD	STK_N	17	161	-	-
	Bach6g00359	674	Gene3D	Transferase(Phosphotransferase) domain 1	475	673	-	-
	Bach6g00359	674	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	375	474	-	-
	Bach6g00359	674	Coils	Coil	268	343	-	-
	Bach6g00359	674	Gene3D	HUPs	9	155	IPR014729	-
	Bach6g00359	674	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	16	139	-	-
	Bach6g00359	674	MobiDBLite	consensus disorder prediction	207	272	-	-
	Bach6g00359	674	PANTHER	OS02G0152300 PROTEIN	18	672	-	-
	Bach6g00359	674	Pfam	Universal stress protein family	18	155	IPR006016	-
	Bach6g00359	674	ProSiteProfiles	Protein kinase domain profile.	402	665	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach6g00359	Bach-Chr6	2599999	2605364	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach6g00359	18	670	Receptor kinase-like Gene Family	AT1G17540	49.133	0.0	637

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-IXb	Bach6g00359		Pkinase	2.3e-40	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach6g00359	-		-	pcin:129290405	828.165