Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00351 TTCATTTTCAGCCAGCGTTGTGTAGAGACCGCCATTGTTTCAGATTTTGCTTTGACGCGGTTTCAGACGGAGGGAGAAGGCAATGGAAGGACGAGCAACTCAGTACAATCCTCGGACAGTGGAAGAGGTTTTTAGGGATTTCAAGGGCCGAAGAGCTGGACTCATCAAAGCCCTTACCACCGATGTTGAAGACTTCTACAGCCAATGTGATCCTGAAAAGGAGAATTTGTGCTTGTATGGATTTCCTAGTGAGCAGTGGGAAGTAAATTTGCCTGCTGAAGAAGTTCCTCCCGAGCTCCCTGAGCCTGTGCTGGGTATTAACTTTGCCAGGGATGGCATGGAAGAAAAGGACTGGTTGTCATTAGTTGCTGTCCATAGTGATGCATGGTTACTTGCCATTGCCTTCTATTTTGGGGCCAGATTTGGGTTTGATAAAGCTGATAGGAAACGGCTTTTCAATATGATTAATGAACTGCCTACAATATTTGAAATTGTTACTGGTACAGCAAAGAAACAAGTTAAGGAGAAGGCTTCAGTTCCAAATCATAGTGGCAACAAATCCAAGTCCAACTCCAAAGTACGGGCTTTAGAACCTCAGGGAAGACAGACAAAGACGATGCAACCAAAGGACGAGGATGAGGGACTGGTTGAGGAAGATGAAGATGAACACGGGGACACCTTGTGTGGCGCTTGCGGCGAGAACTATGGTACTGATGAATTCTGGATCTGTTGTGACGTCTGCGAATTGTGGTTCCATGGCAAGTGTGTGAAGATCACCCCTGCTAGGGCAGAGCATATCAAGCAATACAAGTGCCCATCATGCAGTAACAAGAAAGCTCGCCCGACTTAGGCAGAGTCCAGGGCAAGTGTGTGGGCTTTTATTGCTTCGCTCTGGTTGATCTGCTTTTCTTGGTTAAGGCTTAATGGATATTTTTGCTTATGTAGATTTTCTATTATAATCTCTAGGAATTCTACAATGATGGTCTAG 988 0.4534 MEGRATQYNPRTVEEVFRDFKGRRAGLIKALTTDVEDFYSQCDPEKENLCLYGFPSEQWEVNLPAEEVPPELPEPVLGINFARDGMEEKDWLSLVAVHSDAWLLAIAFYFGARFGFDKADRKRLFNMINELPTIFEIVTGTAKKQVKEKASVPNHSGNKSKSNSKVRALEPQGRQTKTMQPKDEDEGLVEEDEDEHGDTLCGACGENYGTDEFWICCDVCELWFHGKCVKITPARAEHIKQYKCPSCSNKKARPT 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00351 255 ProSiteProfiles Zinc finger PHD-type profile. 198 250 IPR019787 -
Bach6g00351 255 Pfam PHD-finger 201 250 IPR019787 -
Bach6g00351 255 Pfam Alfin 12 139 IPR021998 GO:0006355|GO:0042393
Bach6g00351 255 ProSitePatterns Zinc finger PHD-type signature. 201 247 IPR019786 -
Bach6g00351 255 SMART PHD_3 200 248 IPR001965 -
Bach6g00351 255 PANTHER CPG BINDING PROTEIN 9 253 IPR045104 GO:0006355|GO:0042393
Bach6g00351 255 CDD PHD_AL_plant 200 250 IPR044104 -
Bach6g00351 255 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 191 249 IPR013083 -
Bach6g00351 255 MobiDBLite consensus disorder prediction 151 176 - -
Bach6g00351 255 MobiDBLite consensus disorder prediction 146 196 - -
Bach6g00351 255 FunFam PHD finger alfin-like protein 193 249 - -
Bach6g00351 255 SUPERFAMILY FYVE/PHD zinc finger 190 252 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00351 Bach-Chr6 2522680 2526635 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00351 1 253 Alfin-like Transcription Factor Family AT3G42790 75.494 3.42e-130 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Alfin-like Bach6g00351 Alfin 6.8e-69 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00351 K26274 - gmx:100794662 454.136