Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00350 ATGGGGTTTCTTATCATGGGTACTATTGGGTCATGGTTGCTAAAGATTGGATCTGTAGTCAAATCTGGGTTCTCCTACGGTTTGAGCTGGAAAATGGGAGTTCTGCCACAACAATCTCATAACGCCAAGCAATTGAATTTTCATTTTCAAGATCAAGATTCATCTTCAACTCAATCAACTGGTCAATCTTATCCTGGAATGGGTTCAACACACTCAGGTCAAATTTGTATACAGTACAGCAATTCTTCCGCTCATACAATGTACAGCAGAACTGGGGAAAAGCCAGTGGGAGCCCTCATCAAGTCATCTACTGGGAGTCAGGATTTTGCTTTTCCTCTTTCTCAATTGGATCATCATAAATCAATTGCTGAACCATACTTTGGTAGTTTTCTGGCTGCTGCTTATGGACCACAGTCTAACATTCATCCTGCTCAATTAATGGGAGTGGCTCCGCTTCGAGTTCCACTTCAGCTTGATCTGACAGAGGAACCCATATACGTGAATGCCAAACAGTACCATGCTATTCTAAGGCGCAGACAGTATCGGGCAAAGCTTGAAGCACGGAACAAACTCCTCAAAGTTCGAAAACCATACCTTCATGAGTCTCGGCATCTCCATGCATTAAAGAGGGCTAGAGGTTCTGGTGGCCGTTTTCTCAACACCAAAAACCTCCAACAATCAAATCATACTCCAACAAGCCATGGCCATGATGGTTCTAGCTGTACTCAGTTGAATCTGAGTGGGAATATATCAGAACCTGAAGCTCATCTGGTAGAGAACTATAAAAATGGTGCTTCCACTGCCTCCTTCTCTGATATCACCAGTGCATCCATCAGTGATGGAATCTTCCACAAACAGCAGACAGACTTCAGGTTCACTGGTTACTCTTCTCATATTGGAAGAAATATCAGAGGTTACTCAGCTGATGTGGGCTGAGGTGGCGGCAATCAGCCGCGTCTCTCTGTCCTCATGTGACACAATCTCATGGCAGGCACCCTATAGCGGTTATTCTTCGGCATTCAGTTGAAGAAGATGACTGCTTGTGTTCCTTTGGGAAGTCATCCTTGGCTCATTTGCATTGTTACTATTGTTTATGTTAACCTTTCAACAACTATGATATGGACCTTGTACTAGCTGTTATGTTGCCCTTCTGGTATTTGGGAATCACGAAGACTTGTTTAAAAGCATGTTATTTCTCTCTTCATATCACACTGCTAATAATTTGGAACCTATGATCCAAAT 1242 0.43 MGFLIMGTIGSWLLKIGSVVKSGFSYGLSWKMGVLPQQSHNAKQLNFHFQDQDSSSTQSTGQSYPGMGSTHSGQICIQYSNSSAHTMYSRTGEKPVGALIKSSTGSQDFAFPLSQLDHHKSIAEPYFGSFLAAAYGPQSNIHPAQLMGVAPLRVPLQLDLTEEPIYVNAKQYHAILRRRQYRAKLEARNKLLKVRKPYLHESRHLHALKRARGSGGRFLNTKNLQQSNHTPTSHGHDGSSCTQLNLSGNISEPEAHLVENYKNGASTASFSDITSASISDGIFHKQQTDFRFTGYSSHIGRNIRGYSADVG 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00350 311 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 37 273 IPR001289 GO:0003700|GO:0006355
Bach6g00350 311 PRINTS CCAAT-binding transcription factor subunit B signature 164 186 IPR001289 GO:0003700|GO:0006355
Bach6g00350 311 PRINTS CCAAT-binding transcription factor subunit B signature 195 218 IPR001289 GO:0003700|GO:0006355
Bach6g00350 311 ProSiteProfiles NF-YA/HAP2 family profile. 161 221 IPR001289 GO:0003700|GO:0006355
Bach6g00350 311 MobiDBLite consensus disorder prediction 216 246 - -
Bach6g00350 311 Gene3D - 161 223 - -
Bach6g00350 311 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 163 218 IPR001289 GO:0003700|GO:0006355
Bach6g00350 311 ProSitePatterns NF-YA/HAP2 subunit signature. 166 186 IPR018362 GO:0003677|GO:0016602
Bach6g00350 311 SMART cbf3 160 221 IPR001289 GO:0003700|GO:0006355
Bach6g00350 311 MobiDBLite consensus disorder prediction 50 69 - -
Bach6g00350 311 MobiDBLite consensus disorder prediction 218 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00350 Bach-Chr6 2518100 2521553 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00350 6 283 CCAAT-HAP2 Transcription Factor Family AT1G17590 41.497 2.13e-49 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Bach6g00350 CBFB_NFYA 3.3e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00350 K08064 - gmx:100500765 350.903