Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00342 TGGGTCTATATTTTTGTTCATATTTGTGTGGCTATTGTTGGTTTTTCTTGGTCATGGTTATCAAAACCATGAAGGAGAAAAGTGGCTAGAGGCCATCTGCTTCAGCTCCCGTTCTCTTTATCACTCTTACTCTTTGGTCTCTTCTGCTCTTTCAAAAAACAAAAATTGTCTCTTGGCTTGGTGCCAAACAAGCCATAAACCATCTAGTTTTATAGTGGAGATTGTTTTCTTCCTTCAAAGAGTTCTCTTTTATTGTTTTTTTCCCATTATTTTTTCTTCTGGGTTTTCAAAGACTATCCTTAGTGACAGTGAGTATCAATTTTGCTACTTTTTTCTGTTCTTTCTCTCTCCTTTACTCTACGCTACAGTCCAGCTCTTTTCCATTTCTGTTCTTGGAGAGGCTTCTCCATAGATCCCAAAACATACGAGAAACCAAGATCTATGGCCCATAAAACAACCTTCGGATTAAAAAAATTTCGAGTTTAAGAGAATACGATGAAGGGTTTGATGTTTCAACAACAGCAGCAGCAGCAACCGGTGGTAGAAGAGAACATGTCTAATTTGACTTCTGCATCTGGTGAAGCTAGTGTTTCCTCAGGAAACAGAAACGAAATTGGTAACAATTATCCTCAACAATATTTTGTTCCACCGCCAGATCAAACCCAGCCACCAGTGAAGAAGAAGAGAAACCTTCCAGGAAACCCAGACCCAGATGCTGAAGTTATCGCCTTGTCCCCCAAGACTCTTCTGGCAACAAACAGGTTCATTTGTGAGATCTGTAACAAAGGATTTCAGAGAGATCAGAATCTTCAACTTCACAAAAGAGGGCATAATCTGCCATGGAAGCTGAAGCAGAGAACAAACAAAGAAATAAGGAAGAAGGTGTATGTGTGCCCAGAAGTCACTTGTGTGCACCATGACCCATCAAGGGCCCTTGGGGACCTAACTGGTATTAAGAAGCACTTCTGCAGGAAGCACGGTGAGAAGAAGTGGAAGTGTGACAAGTGCTCAAAGAGGTATGCAGTTCAATCAGATTGGAAAGCTCATTCAAAAACCTGTGGCACAAGGGAGTACAGATGTGACTGTGGAACCCTCTTCTCCAGGAGGGACAGTTTCATAACCCACAGAGCATTCTGTGATGCATTAGCAGAGGAGAGTGCAAGAGCAATCACAGGCACAGCAAACCCACTTCTTCCTTCTCAACCTGGGTCTTCTGCAATAAACCTTCAGCCTCAATTCAACCCCCAAGATATCCATGCTTTCCCATTGAAAAAGGAGCAACAAAGTTTCAATCTTAGGCCAGAAATACCTCCTTGGCTAGCCTGCCCTGGCCCACCCACTGTTGATCTCTCCAGTACTTCGTCAATTTTCTCAACAAGATTGGATCAGGAATTCTCAGAAACACAACACAGGCATGATGTAGACCTCCACGAAAACCCAAACCCTAACCCTAGCCTTGGACCCACTTTCCCTGCCTTCCAACCAGCGGCTTCCCCGCACATGTCAGCTACAGCGTTGCTGCAGAAAGCAGCTCAAATGGGTGCAACCATGAGCAAAACTGGCTCCTCACCAGTCATGATTAGGACCCACCAGCAGGCTCACGTGTCTGCTGATCCTGCCAACAATTCAACTTCAAGTGGTAATTTTGTTTTGAATTTGTCTTCACGTGAAGATCAGATGACTGCCAGTACTGGGTTTGGCCATGGCTTGGCTCCATTCGGGAATAAAGCTGCTGCTTCTGCTGCAACAACCACTGGTACTGGTGCCTCCTCAGGTGTTCCTTCGTCCCTTCTTCATGACGTTATGAACTCTTTCTCTTCTGCTTCTGGGTTTGAAGGAACTTCTTTTGAGGATGCCTTTGGTGGCATTTTGAATTCAAAGACCACCAAAGATGCAAACTTTAATGATACCCTTCCGAAAACAACCACCGCCGGCCGTCTAGGTAGCGCCACCGATGATGGCGGTGGCGGAAATGAAGGATTGACGAGGGATTTCTTGGGTCTAAGGCCACTGTCTCATAGTGAGATTCTCAGCATTGCTGGTATTGGAAACTGCATGACCACTTCCACCACCTCCCATGATCAACAAAACCAATCCCAAAAGCCATGGCAAGGTTAGCTCCACC 2125 0.4494 MKGLMFQQQQQQQPVVEENMSNLTSASGEASVSSGNRNEIGNNYPQQYFVPPPDQTQPPVKKKRNLPGNPDPDAEVIALSPKTLLATNRFICEICNKGFQRDQNLQLHKRGHNLPWKLKQRTNKEIRKKVYVCPEVTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEESARAITGTANPLLPSQPGSSAINLQPQFNPQDIHAFPLKKEQQSFNLRPEIPPWLACPGPPTVDLSSTSSIFSTRLDQEFSETQHRHDVDLHENPNPNPSLGPTFPAFQPAASPHMSATALLQKAAQMGATMSKTGSSPVMIRTHQQAHVSADPANNSTSSGNFVLNLSSREDQMTASTGFGHGLAPFGNKAAASAATTTGTGASSGVPSSLLHDVMNSFSSASGFEGTSFEDAFGGILNSKTTKDANFNDTLPKTTTAGRLGSATDDGGGGNEGLTRDFLGLRPLSHSEILSIAGIGNCMTTSTTSHDQQNQSQKPWQG 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00342 540 Gene3D Classic Zinc Finger 144 223 - -
Bach6g00342 540 FunFam protein indeterminate-domain 5, chloroplastic-like 144 223 - -
Bach6g00342 540 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 33 523 IPR031140 -
Bach6g00342 540 FunFam protein indeterminate-domain 12-like 69 137 - -
Bach6g00342 540 ProSitePatterns Zinc finger C2H2 type domain signature. 92 112 IPR013087 -
Bach6g00342 540 Gene3D Classic Zinc Finger 70 138 - -
Bach6g00342 540 MobiDBLite consensus disorder prediction 1 75 - -
Bach6g00342 540 Pfam Zinc-finger double-stranded RNA-binding 90 112 IPR022755 -
Bach6g00342 540 SMART c2h2final6 90 112 IPR013087 -
Bach6g00342 540 SMART c2h2final6 131 161 IPR013087 -
Bach6g00342 540 SMART c2h2final6 166 186 IPR013087 -
Bach6g00342 540 MobiDBLite consensus disorder prediction 1 50 - -
Bach6g00342 540 MobiDBLite consensus disorder prediction 465 483 - -
Bach6g00342 540 MobiDBLite consensus disorder prediction 465 493 - -
Bach6g00342 540 ProSiteProfiles Zinc finger C2H2 type domain profile. 90 112 IPR013087 -
Bach6g00342 540 SUPERFAMILY beta-beta-alpha zinc fingers 89 186 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00342 Bach-Chr6 2441582 2444316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00342 20 540 IDZ Gene Family AT3G13810 46.758 7.46e-142 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach6g00342 zf-C2H2_jaz 5.6e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00342 K25870 - qsa:O6P43_027636 801.586