Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00340 ATGAACATCTCATCAAGAAATGGTAACGGCACTACCCAGGCTTGCGCAGCTTGTAAGTACCAACGAAGGAAGTGCGCTCCTGACTGCATTCTCGCACCTTATTTTCCTCACGATCGCCCAAGGCAATTCCTTAATGCCCATAAATTGTTTGGTGTTAGAAACATCACAAAAATCATTGAGAACCTTGACCCACTTGAAAAGGACCAAGCCATGCGTTCCATCATTATTCAATCTGATATCAGAGCCAATGACCCTGTTGGTGGTTGCTATAGAATTATTCAAGCCCTTCAAGCTGAGATCGAATACTATAGGGCTGAGCTTGATCTTGTTCTCCAACAACTAGCCATTGCCAGAGCACAGGCTCAGGCTCAGGCTCAAGTTCATCATGATTACAATGCAGATCCTCATCAACATCGAGTTATCAATGCCGTTGAACCTTTAAACTTGTATAACCCCGTGGCAGCGTCCAATTATCATTATCTTCAACCACAACAAGGAGAAGATCCGTATATCATGGTGCAAGATAACAGTGCTAATACTAGTCACAATAACACCCCTTTGCAGCAAGATGTTGATGCATGGGCCATGCACAATTCTGTGTCCTTGTCTTTGCATGGGAAGAATGGTCATGTTGATGATGATTATGATCACAAGCCAGTGCTTGAGATACCTTCTGATGAAAGCAATGAACTCAGATTCCACCCTCAAGAATTAGTTGATCACAGTGATGAAGCGGTTATGTTTAAGGTAGAAAACGGAGAAGTAATAGACGCAGAGGCTGACTGCATGCAACAAGTTCAAGATCATGATCTGAAAGGCGCAGCTACTTTCTTTACTCTCACAAATTGTACCAGCTGA 858 0.4312 MNISSRNGNGTTQACAACKYQRRKCAPDCILAPYFPHDRPRQFLNAHKLFGVRNITKIIENLDPLEKDQAMRSIIIQSDIRANDPVGGCYRIIQALQAEIEYYRAELDLVLQQLAIARAQAQAQAQVHHDYNADPHQHRVINAVEPLNLYNPVAASNYHYLQPQQGEDPYIMVQDNSANTSHNNTPLQQDVDAWAMHNSVSLSLHGKNGHVDDDYDHKPVLEIPSDESNELRFHPQELVDHSDEAVMFKVENGEVIDAEADCMQQVQDHDLKGAATFFTLTNCTS 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00340 285 Coils Coil 93 113 - -
Bach6g00340 285 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 12 153 - -
Bach6g00340 285 Pfam Lateral organ boundaries (LOB) domain 14 109 IPR004883 -
Bach6g00340 285 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00340 Bach-Chr6 2419346 2420711 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00340 13 234 AS2 family AT3G13850 47.186 1.25e-56 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bach6g00340 LOB 1.7e-34 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach14g00245 14 1669382 1670715 Bach6g00340 6 2419346 2420711 BWGD