Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00325 ATGACTCTGGCTAGAGATCCTCAAACAGAAATCCCACATGCAAGAGGAGTAAAGCTAGGTGAGCTATTGAAGAAGAAGGCAGAGGAAGGAGTGGCAATGAGGCTAATGCTTTGGGATGATGAAACTTCTTTGCCATTTATAAAGAACAAAGGTCTGATGAACACCCAAGATGAAGATACCTTTGCTTATTTCAAACACACAAAAGTAATATGCAGAAAGTGTCCAAGATTGCACAATAAGCTCCCCACACTCTTTGCTCACCACCAGAAAACCATTGGCTTGGACACCAAGGTACCCAATTCTGCAAATGACAGAGAGATTATGAGTTTTGTTGACAAATATGCAGGAGCTACCCTTAACAAAGGAGGGCCAAGAGAGCCTTGGCATGATGTTCATGCTTGTGTTACTGGTGAGGCAGCTTGGGATGTGTTAACCAACTTCGAGCAAAGATGGGCTAAGCAATGTGATTCTCTCCTTTTAGCCCCTGCTGCTACCTTAGAGAGGGATTGGAAAGTTCAAGTGTATAGGTCAATTGACCATGTCTCTGCTAGCCAATTGTTCAGAAAGTTAACTGTGGAAAGGAACATCCATGAAGCCTATGTTGAAGTGAAGCAATTAGGGCACCCAAGAGACTACTTGAATTTCTTCTGCCTAGCAAATAGGGAACACGAGGGAAAACATGAGTACCTTCCTCCACATTCTCCTCACCCTCAGACACAACACTGGAATGCCCAAAAGAATAGAAGGTTCATGGTTTATGTCCACTCCAAGATCATGATAGTGGACGACGTATATACTATAATAGGATCAGCAAATGTGAATCAAAGATCCATGGATGGGCAAAGGGGCGCTGAGATTGCGATAGGATGCTACCAGAGTGAAGATGGAACTGATAACAAAATGAAGCGCGGTGATATTCATGCATACAGAATGTCATTGTGGTCTGTAGAGGACCTAATTGATGGTGGGAGTCATTTTCCTGATACAAAATCTCTGATAAAGGGAAAGAGATCAAAACTGCTACCTCCTGTCTTTGGTGAGAAGCTCTGTGCCGCGTTCATACCGCTCATAGCATTAGTAGATGCTATAAATTTTAGCTTGGCTGGTTGCTTCGAATGTTATCCTCCAAAAAAGGGAATCTATTATACATTCGAGGATCTAGTCCGTCTCTCTAAGAATTCTCCATTTACTGTTAATGAAACTGAGGCGTTGTTTGATTTATTCAATAAGTTGAGCAATTCAATCATTCATGATGGTCTGATACACAAGGAAGAGCTGAGATTGGCACTACTGAAAACCTCTGCTGGCGAGAATCTTTTCCTTGATAGGGTATTTGATCTCTTTGATGAAAAAAGAAATGGCGTTATTGAATTTGAGGAGTTTGTGCATGCTCTCAGTGTCTTTCATCCTTGTGCTCCCCTTGAAAAGAAAATTGATTTTGCTTTCAGATTGTATGACTTGAGACAGACTGGATTTATTGAGAGGGAAGAAGTGAGTATCTTGGTTTGTCTAGGTTTGGGAAATGTAACTGGCTTAAGTTAATGTTTTGTTAGTATAAAATAATAATTCATGGTTAAGTATGCCACCGGTGAGTGGAGACACCGAAATCTCTTTGCATACGATCAATTTGATTTGGGAATATTCATAGAGACAGGTGGTAGTTTCTGTTTATCATATTTTTGAAGATGTTGTGGTAGTCTATTGATACATAGAAGTCATGACCATGATGTACGTGAAATAATATA 1745 0.4057 MTLARDPQTEIPHARGVKLGELLKKKAEEGVAMRLMLWDDETSLPFIKNKGLMNTQDEDTFAYFKHTKVICRKCPRLHNKLPTLFAHHQKTIGLDTKVPNSANDREIMSFVDKYAGATLNKGGPREPWHDVHACVTGEAAWDVLTNFEQRWAKQCDSLLLAPAATLERDWKVQVYRSIDHVSASQLFRKLTVERNIHEAYVEVKQLGHPRDYLNFFCLANREHEGKHEYLPPHSPHPQTQHWNAQKNRRFMVYVHSKIMIVDDVYTIIGSANVNQRSMDGQRGAEIAIGCYQSEDGTDNKMKRGDIHAYRMSLWSVEDLIDGGSHFPDTKSLIKGKRSKLLPPVFGEKLCAAFIPLIALVDAINFSLAGCFECYPPKKGIYYTFEDLVRLSKNSPFTVNETEALFDLFNKLSNSIIHDGLIHKEELRLALLKTSAGENLFLDRVFDLFDEKRNGVIEFEEFVHALSVFHPCAPLEKKIDFAFRLYDLRQTGFIEREEVSILVCLGLGNVTGLS 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00325 513 SMART pld_4 250 277 IPR001736 GO:0003824
Bach6g00325 513 Gene3D Endonuclease Chain A 167 299 - -
Bach6g00325 513 SUPERFAMILY EF-hand 390 503 IPR011992 -
Bach6g00325 513 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 250 277 IPR001736 GO:0003824
Bach6g00325 513 Pfam Phospholipase D Active site motif 253 277 IPR001736 GO:0003824
Bach6g00325 513 Gene3D Endonuclease Chain A 11 166 - -
Bach6g00325 513 CDD EFh 400 466 IPR002048 GO:0005509
Bach6g00325 513 PANTHER PHOSPHOLIPASE D 2 111 IPR015679 -
Bach6g00325 513 SUPERFAMILY Phospholipase D/nuclease 16 288 - -
Bach6g00325 513 Gene3D - 388 506 - -
Bach6g00325 513 ProSiteProfiles EF-hand calcium-binding domain profile. 473 508 IPR002048 GO:0005509
Bach6g00325 513 CDD EFh 441 497 IPR002048 GO:0005509
Bach6g00325 513 ProSiteProfiles EF-hand calcium-binding domain profile. 436 471 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00325 Bach-Chr6 2299766 2306257 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00325 196 338 Phospholipase D Gene Family (Wang group) AT1G55180 53.642 3.02e-42 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00325 K06268 K01115 ming:122068814 264.618