Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00311 ATGAATTCGACTAAGATACTTCTTCCCGGTAAGGAGAAGATGGCGACAGTACCAGGGCAGCTCATATGGGAGATCGTGAAGAAGAACAACTCTTTTTTGGTGAAGGAGTTCGGTAACGGCACTGCTAGCGTGCAGTTCAGCAAAGAGAGCAACAATCTCTACAACCTCAACTCTTTCAAATACTCTGGTTTAGCAAACAAGAAAACTGTTACAATTCAACCTGCGGATAAGGATCAATCCGTGTTGCTGGCAACTACCAAGACAAAGAAGCAGAACAAGCCTTCTCATTTGCTTCACAAATCGGTTATGAAGAAGGAGTTCAGGAGGATGGCGAATGCAGTGGTAAACCAGGTGGCCAATAACTACTACAGGCCTGATCTTAAGAAGGCGGCCCTTGCAAGGTTGAGTGCTGTTAATAGGAGCCTCAAAGTTGCGAAGTCCGGTGTTAAGAAGAGAAACAGACAGGCTACAAAGGTCTGCGGTAGGAAGTGAATTGAGAAGGATTATATTGCATCAAACCCTCTTTTTATTCCTTTGTAGTTTCTGTTCCAACAACTGCACACTAGATTGAGTTTTGTTCGAGATTGAGTCTTTTTATATAGAACCATAACTAGTATGTTAAAGCTTTCAAGTATCAACTTTG 643 0.4246 MNSTKILLPGKEKMATVPGQLIWEIVKKNNSFLVKEFGNGTASVQFSKESNNLYNLNSFKYSGLANKKTVTIQPADKDQSVLLATTKTKKQNKPSHLLHKSVMKKEFRRMANAVVNQVANNYYRPDLKKAALARLSAVNRSLKVAKSGVKKRNRQATKVCGRK 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00311 163 FunFam 60S ribosomal protein L28 18 146 - -
Bach6g00311 163 Pfam Ribosomal L28e protein family 21 141 IPR029004 -
Bach6g00311 163 Gene3D - 19 146 - -
Bach6g00311 163 PANTHER 60S RIBOSOMAL PROTEIN L28 14 162 IPR002672 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00311 Bach-Chr6 2185730 2188875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00311 14 156 Cytoplasmic Ribosomal Protein Gene Family AT2G19730 74.825 7.25e-76 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00311 K02903 - jre:109007896 258.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach14g00221 14 1488924 1490669 Bach6g00311 6 2185730 2188875 BWGD
Bach6g00311 6 2185730 2188875 Bach14g00221 14 1488924 1490669 ECH
Bach6g00311 6 2185730 2188875 Bach6g00311 6 2185730 2188875 ECH