Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00302 ATGGATAACATGAGTTGGGATGCCTCACAAATTGTAGCAAGCATGCCGATGATCTTATGGAGCACTCAGCAACACGATCTTGAAGCAGCAGGCTATCAAATGCCAGAGATGCAGAAGGCTAAAGATTTTGGAAAAATGAGTGACATGGTTCAGTCAGCAGTTACAGCTTCGGAGATAATGAATGTGATGCCAAGCATAAATCTTTCACAGCAAGCAGCAACCGCGGAGGCGAAATCAGGAGCAACGACTAGTTGGGGAGAATGTCTAAAATCCCAATCATGCCAGTCCCTTTCAGCAAATGGACCTTACAGTGTGAACCCAGTTAGCAATTTTGTACCAGGTTTCAACATGGCCCACCAACAACAACTTGTCAATGGCTCATCTCAAAATGGCAAGGCTACCTACTCTCTTGAGTCACTAGATTATTGCTTGCTCTCAACTACTAATAGCAACACAGTAGACACTTCTGCAGAAGATGATGGTATTTCAATGATTTTATCTGACTACAGAAACTTGTGGAACTTCAGTTATGGCAGTAGTGCTACTGCAGTTTCCTCCGGTGAATCTGAGAGCAATGCTTCTAATGGTAGAAACGAAGACACGCAGTATGGAGTTAACGAACTTGATGAAACAGTCTCTCAAAGTTCTTCAGATCGACATGCCAATCAAGGTAAAATCGTAGAATCAAAGCCTAATGGTATAAAAAGGAGTAATGATCAATCTGAGTTGGTCAGACTTGATGCTGGTGATCCTTACTTTACCATTATTCAGAATCCTTTTGCTACTGAAGGTGGTCTCAGGCTTATTTCAGACAATCCACCAAAATCCAAAAAACTTAGATGGGAAAAGCGTCCTACCTCATCAAATATCAACTTTCAGCAGCCAAATTCATCTTTGTCATCTTCCAATGTTGAAGAACCTGATCCAGAGGCCATAGCACACATGAAGGAGATGATATATAGGGCTGCAGCTTTTAGGCCAGTGAACTTAGGCTTGGAGGTGGTGGAAAAGCCCAAGAGGAAGAATGTCAGGATATCAACAGATCCTCAAACAGTGGCTGCAAGGCAAAGGAGGGAGAGAATAAGCGAAAGAATTAAGGTTTTGCAGAAGCTAGTGCCTGGTGGAAGCAAGATGGACACAGCATCAATGCTTGATGAAGCTGCAAACTACCTCAAGTTTCTCAGGTCACAGGTCAAAGCACTAGAAAATCTAGGAAATAAGATTGACTCAATGAATGTTCCCCCTTCTAGCATTGCTTTCTCCTTCAATCCCTCTTTTCCAATGCAAACCCATTTCCCAATTCAAAACCCTAGCAACATCCAGCACTCCAGTTGA 1335 0.427 MDNMSWDASQIVASMPMILWSTQQHDLEAAGYQMPEMQKAKDFGKMSDMVQSAVTASEIMNVMPSINLSQQAATAEAKSGATTSWGECLKSQSCQSLSANGPYSVNPVSNFVPGFNMAHQQQLVNGSSQNGKATYSLESLDYCLLSTTNSNTVDTSAEDDGISMILSDYRNLWNFSYGSSATAVSSGESESNASNGRNEDTQYGVNELDETVSQSSSDRHANQGKIVESKPNGIKRSNDQSELVRLDAGDPYFTIIQNPFATEGGLRLISDNPPKSKKLRWEKRPTSSNINFQQPNSSLSSSNVEEPDPEAIAHMKEMIYRAAAFRPVNLGLEVVEKPKRKNVRISTDPQTVAARQRRERISERIKVLQKLVPGGSKMDTASMLDEAANYLKFLRSQVKALENLGNKIDSMNVPPSSIAFSFNPSFPMQTHFPIQNPSNIQHSS 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00302 444 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 350 405 IPR036638 GO:0046983
Bach6g00302 444 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 150 439 IPR045843 GO:0003700|GO:0006355
Bach6g00302 444 MobiDBLite consensus disorder prediction 271 305 - -
Bach6g00302 444 CDD bHLH_AtIND_like 346 404 - -
Bach6g00302 444 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 345 394 IPR011598 GO:0046983
Bach6g00302 444 Gene3D - 350 413 IPR036638 GO:0046983
Bach6g00302 444 SMART finulus 351 400 IPR011598 GO:0046983
Bach6g00302 444 MobiDBLite consensus disorder prediction 210 239 - -
Bach6g00302 444 Pfam Helix-loop-helix DNA-binding domain 355 394 IPR011598 GO:0046983
Bach6g00302 444 MobiDBLite consensus disorder prediction 285 305 - -
Bach6g00302 444 Coils Coil 384 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00302 Bach-Chr6 2121110 2122444 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00302 80 442 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 48.806 2.66e-82 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach6g00302 HLH 3.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00302 - - vra:106773034 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach14g00215 14 1456798 1458102 Bach6g00302 6 2121110 2122444 BWGD
Bach6g00302 6 2121110 2122444 Bach6g00302 6 2121110 2122444 ECH