Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00277 GCGGCTTTCCCTTAAGACTCTCTCTTCTTATATTTTGTCTCTCATTTCTTTCTCTCTCCCGCTGATACAACAACCGAAAGACTCTCTCTTCTCACGTTTCATTCGCCATCATGATCTCCTCGAATAGATGCAGCTTCCTGAGCAACCCAGGTTTAGCTGGGTCTTCCGGCTCATTCTCTCGTGTCCAGAGAAGGCATTCGGCTTCTTTCAGGGTAGTGGCTCTAGCTCCAACCAGCCGGTCAGGTGACAGAAACAGCAGCGTTGTGATGGATTTGAAAGACATAAAAGATGATTCTGCGATCATTGACGTGGAGCATCATCCCACCGTCGGTGGCGGCGTCCAGGACGCGTACGGCGAGGATAGGGCTACAGAGGATCAGTTTGTTACTCCATGGAGTGTTTCAGTTGCTAGTGGGTACTCTTTGTTGCGAGATCCACACCACAACAAAGGACTTGCCTTCAGTGAAAGAGAGAGGGATGCCCACTACTTGCGTGGTCTTCTTCCCCCAACAGTTATTCCTCAAGAAACTCAGGTGAAGAAAATGATCCAGCATATGCGCCAGTACGATGTTCCATTACAAAAATACATGGCAATGATGAATCTTCAGGAGACAAATGAAAGGTTGTTTTACAAGCTTCTGATTGACCATGTTGAGGAGTTACTTCCAGTTGTCTATACTCCAACTGTTGGTGAAGCTTGTCAGAAATATGGGAGCATCTTTTTGAAACCTCAGGGTCTTTATATAAGTTTGAAAGAGAAGGGGAGGATTCTTGAAGTACTAAGGAATTGGCCTGAGAAGAACATTCAAGTCATTGTTGTAACTGATGGGGAGCGGATCCTGGGTCTCGGTGATCTTGGCTGTCAGGGGATGGGAATACCAGTGGGAAAACTTTCTTTGTATTCAGCACTTGGAGGAGTTCGCCCTTCAGCTTGCTTGCCTATTACCATTGATGTGGGCACAAACAATGAGAAGCTGTTGAATGATGAATTATACATAGGACTCAAGCAAAGACGAGCAACTGGGCAGGAATATACTGAACTTATACATGAGTTTATGACTGCGGTCAAGCAAAATTATGGTGAAAAAGTCCTCATTCAGTTTGAAGATTTTGCAAACCACAATGCTTTTGATCTGCTTGAAAAATATGGCTCTACTCATCTTGTCTTCAACGATGATATTCAGGGAACAGCATCAGTAGTACTGGCTGGACTAATGGCAGCTCTGAAAGTGGTGGGAGGAAGCTTAGCTGACCACAGATTCTTATTCCTTGGTGCTGGAGAGGCTGGAACTGGAATAGCAGAACTCATAGCACTGGAAACATCAAAACAGACAAATGCCCCGCTGGATGAAATCCGCAAGAACATTTGGCTGGTGGACTCAAAGGGATTGATTGTGAGTTCACGCAAGGAATCACTCCAACATTTTAAGAAGCCCTGGGCTCATGAACATGAACCTGTTAAGGAACTTGTAGATGCTGTTAATAAACTAAAGCCAACGGTGCTGATTGGAACATCAGGACAAGGGAGAACTTTTACTAAAGAGGTGGTTGAAGCTATGGCTGCCATTAATGAGAAACCTATTATCCTGTCTCTCTCAAATCCAACCTCACAATCGGAATGCACTGCTGAAGAAGCTTACAAATGGAGCCGGGGACGTGCCATATTTGCTAGTGGAAGCCCATTTCCCCCGGTTGAATACGATGGAAAAGTTTTTGTGCCTGGCCAGGCAAATAATGCATACATCTTCCCCGGATTCGGTCTAGGTTTAATAATGTCTGGGACGATCCGAGTGCACGATGACCTACTTCTGGCAGCATCCGAGGCGTTGGCTTCACAGGTTAGCCAGGAGAACTTTGACAAGGGACTCATATACCCACCATTCACTGACATCAGAAACATTTCCGCACACATAGCTGCCAAAGTAGCCGCCAAGGCTTATGAGCTAGGCTTGGCCACTCGTCTTCCTCAGCCTAAAGATTTGGTCAAATATGCTAGGAGCTGTATGTATACCCCAACCTATAGTTCCTACCGCTGA 2036 0.4573 MISSNRCSFLSNPGLAGSSGSFSRVQRRHSASFRVVALAPTSRSGDRNSSVVMDLKDIKDDSAIIDVEHHPTVGGGVQDAYGEDRATEDQFVTPWSVSVASGYSLLRDPHHNKGLAFSERERDAHYLRGLLPPTVIPQETQVKKMIQHMRQYDVPLQKYMAMMNLQETNERLFYKLLIDHVEELLPVVYTPTVGEACQKYGSIFLKPQGLYISLKEKGRILEVLRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYSALGGVRPSACLPITIDVGTNNEKLLNDELYIGLKQRRATGQEYTELIHEFMTAVKQNYGEKVLIQFEDFANHNAFDLLEKYGSTHLVFNDDIQGTASVVLAGLMAALKVVGGSLADHRFLFLGAGEAGTGIAELIALETSKQTNAPLDEIRKNIWLVDSKGLIVSSRKESLQHFKKPWAHEHEPVKELVDAVNKLKPTVLIGTSGQGRTFTKEVVEAMAAINEKPIILSLSNPTSQSECTAEEAYKWSRGRAIFASGSPFPPVEYDGKVFVPGQANNAYIFPGFGLGLIMSGTIRVHDDLLLAASEALASQVSQENFDKGLIYPPFTDIRNISAHIAAKVAAKAYELGLATRLPQPKDLVKYARSCMYTPTYSSYR 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00277 641 CDD NAD_bind_1_malic_enz 357 635 - -
Bach6g00277 641 PRINTS Malic enzyme signature 487 503 IPR001891 GO:0004470|GO:0004471
Bach6g00277 641 PRINTS Malic enzyme signature 268 290 IPR001891 GO:0004470|GO:0004471
Bach6g00277 641 PRINTS Malic enzyme signature 384 400 IPR001891 GO:0004470|GO:0004471
Bach6g00277 641 PRINTS Malic enzyme signature 232 261 IPR001891 GO:0004470|GO:0004471
Bach6g00277 641 PRINTS Malic enzyme signature 172 196 IPR001891 GO:0004470|GO:0004471
Bach6g00277 641 PRINTS Malic enzyme signature 353 369 IPR001891 GO:0004470|GO:0004471
Bach6g00277 641 PRINTS Malic enzyme signature 328 346 IPR001891 GO:0004470|GO:0004471
Bach6g00277 641 SMART Malic_M_2 357 610 IPR012302 GO:0051287
Bach6g00277 641 Pfam Malic enzyme, N-terminal domain 166 346 IPR012301 GO:0004471
Bach6g00277 641 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 357 640 IPR036291 -
Bach6g00277 641 Gene3D - 355 641 - -
Bach6g00277 641 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 79 356 IPR046346 -
Bach6g00277 641 PIRSF ME 70 641 IPR001891 GO:0004470|GO:0004471
Bach6g00277 641 SMART malic_2 166 347 IPR012301 GO:0004471
Bach6g00277 641 Pfam Malic enzyme, NAD binding domain 357 609 IPR012302 GO:0051287
Bach6g00277 641 PANTHER MALIC ENZYME-RELATED 72 640 - -
Bach6g00277 641 FunFam Malic enzyme 100 354 - -
Bach6g00277 641 FunFam Malic enzyme 355 641 - -
Bach6g00277 641 ProSitePatterns Malic enzymes signature. 353 369 IPR015884 GO:0004471
Bach6g00277 641 Gene3D - 100 354 IPR037062 GO:0004471
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00277 Bach-Chr6 1894584 1899808 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00277 K00029 - gmx:100791514 1103.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach14g00197 14 1303660 1308815 Bach6g00277 6 1894584 1899808 BWGD
Bach6g00277 6 1894584 1899808 Bach6g00277 6 1894584 1899808 ECH
Bach6g00277 6 1894584 1899808 Bach14g00197 14 1303660 1308815 ECH
Bach1g01597 1 29609887 29614100 Bach6g00277 6 1894584 1899808 ECH
Bach6g00277 6 1894584 1899808 Bach1g01106 1 24107775 24109074 ECH