Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00270 ATGGAAGTGCCAAAATACTTCGTTGGTGGCTATTTCAATGCCGTGACAGACCAATTTTCGCCCGAGAAACGACATGGTGACCAGAAGCCCGGCGAATCGTTCGCCATTGATGACCTCCTTGACTTCTCTAACGCAGATGCTATTATGTCCGATGGTTTCTTTGACAATGTCGCCGGAAACTCCACCGATTCTTCCTCTGTTACCGCTGTTGACAGCTGCAACTCCTCAATTTCTGGCAACGACAACCACCTCTCCGGCAACATTGCCTCTCGAGGCTTCGGCGATCCTCATTTCTTCGGTGAATTTGTTGTTCCGAGTGAGGACTTGGCTGAGCTAGAATGGCTATCGAACTTTGTGGAAGACTCATTCTCAGCCGAAGAAGAGCTAAAAACGCTCCACCTTCTCTCCGGAGCCACCGCTTCCACCATTGGCACGAAACCCCAGACTCCAGAATCTTCATCATCCTCCGAAACACTTCCACCGTTCGTTGCTGAAGCCTCACGAAACGCACCGTTTTTCCATCCAGAAACTCCGCTTCCAGGCAAGGCGCGGAGCAAGCGTTCACGCGCCGCTCCCGGGGACTGGTCCACGCGCCTCCTCCACCTCGTCAACCCAACACCCAGCGCCACGACGACCGAACAGAAACCGATCAAACAAACTCCGTCCAAGAAGAGGGAGAGTTCCAATTCGGACTCTTCGGGCCGGAAATGCTTGCACTGCGCCGCCGAGAAGACCCCGCAATGGCGAACCGGACCCATGGGCCCAAAGACGCTGTGCAATGCTTGTGGAGTTCGATACAAGTCCGGGAGGTTGGTGGCGGAATACCGTCCGGCGGCGAGCCCGACGTTTATGTCGACGAAGCATTCCAATTCGCATAGGAAGGTTTTGGAGCTGAGAAGGCAGAAAGAGTTGCAACGGCATCAACAGCACCACTTACTTACTCAGAGTTCGCTTTTTGGCGTATCCAACGGTGGAGAAGATTACTTGATTCACCCTCATACTGGGCTAGACTATAGGCAGATTATTTAG 1029 0.5326 MEVPKYFVGGYFNAVTDQFSPEKRHGDQKPGESFAIDDLLDFSNADAIMSDGFFDNVAGNSTDSSSVTAVDSCNSSISGNDNHLSGNIASRGFGDPHFFGEFVVPSEDLAELEWLSNFVEDSFSAEEELKTLHLLSGATASTIGTKPQTPESSSSSETLPPFVAEASRNAPFFHPETPLPGKARSKRSRAAPGDWSTRLLHLVNPTPSATTTEQKPIKQTPSKKRESSNSDSSGRKCLHCAAEKTPQWRTGPMGPKTLCNACGVRYKSGRLVAEYRPAASPTFMSTKHSNSHRKVLELRRQKELQRHQQHHLLTQSSLFGVSNGGEDYLIHPHTGLDYRQII 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00270 342 FunFam GATA transcription factor 226 312 - -
Bach6g00270 342 PIRSF Txn_fac_GATA_plant 17 323 IPR016679 GO:0003677|GO:0005634|GO:0045893
Bach6g00270 342 PANTHER GATA TRANSCRIPTION FACTOR 25 308 - -
Bach6g00270 342 MobiDBLite consensus disorder prediction 218 232 - -
Bach6g00270 342 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 232 294 - -
Bach6g00270 342 CDD ZnF_GATA 236 283 IPR000679 GO:0006355|GO:0043565
Bach6g00270 342 MobiDBLite consensus disorder prediction 201 217 - -
Bach6g00270 342 Pfam GATA zinc finger 237 270 IPR000679 GO:0006355|GO:0043565
Bach6g00270 342 ProSitePatterns GATA-type zinc finger domain. 237 262 IPR000679 GO:0006355|GO:0043565
Bach6g00270 342 MobiDBLite consensus disorder prediction 171 236 - -
Bach6g00270 342 SMART GATA_3 231 281 IPR000679 GO:0006355|GO:0043565
Bach6g00270 342 Gene3D - 231 282 IPR013088 GO:0006355|GO:0008270
Bach6g00270 342 ProSiteProfiles GATA-type zinc finger domain profile. 231 267 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00270 Bach-Chr6 1836638 1838047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00270 32 342 C2C2-Gata Transcription Factor Family AT4G32890 45.312 2.73e-81 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bach6g00270 GATA 2e-14 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00270 - - qsa:O6P43_018201 456.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach6g00270 6 1836638 1838047 Bach6g00270 6 1836638 1838047 ECH