Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00265 ATGAATGCTATCGATAATTGCTGGAGATGGAACCCAGAATGGCGTAGACACCGCCCTCAACTTGCTTCCTGCTCTGTGGGATTTGCAGGAAAGATGACAAATAACCTTGGCAAACACCTCATCCACTACAAAGTCACTGATCCTCTTGATGACCCAATTAACCCAAAACCAGGCACCTTGAGATATGGAGCAAGCTTGATTCAAGGCAAAGTATGGATCACATTCCAAAGAGACATGCACATTCAGCTCCATAGACCTCTTCTTATCAGCAGCTTCACCGCCATTGATGGCCGAGGTGTCAACATTCACATTTCTCATAATGCATGCTTGATGATCTTTAAGGCAAGCAACGTAATCATCCATGGCCTTAGGATCCATCATTGCAAGCCTCAAGGACCAGGCACAGTGATGGGTCCTGAGGGGAAACTCATTCAACTGGGTCAGGTAGATGGAGATGCAATTAGATTGGTCACGGCTTCAAAGATTTGGATTGACCATAACACCCTTTACGATTGCCAAGATGGTCTTCTGGATGTGACCCGTGGTTCCACCAATGTGACAGTCTCCAACAACTGGTTCAGAGAGCAGAACAAGGTTATGCTTCTTGGCCACGATGATGGCTTCATCAGGGACCAGAATATGAAGGTCACCGTTATCTATAACCATTTCGGGCCTAATTGCGGCCAGCGCATGCCAAGGATCCGGCATGGGTATGCACATGTGGCAAACAATCTATACCAGGGATGGGTGCAATACGCCATTGGTGGAAGCATGGGACCAAGCCTCAAAAGCGAAGCCAACCTCTTCATAGCCCCACAAACAAAGAATAAGGAGGTGACTTGGAGAAGAGGGAATTTAAAGGACAATGTGGAGAAATGGGAATTCTATTCTGTGGGAGACGTATTTGAAAATGGAGCTTGCTTCAGGGAAACAAAAAGTGTTGGGGCAAAGCCAAATTACAACATGGAGCAGATGTTCAAAGTTGCAGATGCCAAATATGTGAAGTCATTGTCAAGCTCAGCAGGTGCATTACGATGCACTAAAACCTCAAGATGCTGA 1059 0.4618 MNAIDNCWRWNPEWRRHRPQLASCSVGFAGKMTNNLGKHLIHYKVTDPLDDPINPKPGTLRYGASLIQGKVWITFQRDMHIQLHRPLLISSFTAIDGRGVNIHISHNACLMIFKASNVIIHGLRIHHCKPQGPGTVMGPEGKLIQLGQVDGDAIRLVTASKIWIDHNTLYDCQDGLLDVTRGSTNVTVSNNWFREQNKVMLLGHDDGFIRDQNMKVTVIYNHFGPNCGQRMPRIRHGYAHVANNLYQGWVQYAIGGSMGPSLKSEANLFIAPQTKNKEVTWRRGNLKDNVEKWEFYSVGDVFENGACFRETKSVGAKPNYNMEQMFKVADAKYVKSLSSSAGALRCTKTSRC 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00265 352 SMART amb_all 78 275 IPR002022 -
Bach6g00265 352 Pfam Pectate lyase 99 269 IPR002022 -
Bach6g00265 352 PRINTS Pollen allergen Amb family signature 86 102 IPR018082 -
Bach6g00265 352 PRINTS Pollen allergen Amb family signature 252 271 IPR018082 -
Bach6g00265 352 PRINTS Pollen allergen Amb family signature 150 171 IPR018082 -
Bach6g00265 352 PRINTS Pollen allergen Amb family signature 293 317 IPR018082 -
Bach6g00265 352 PRINTS Pollen allergen Amb family signature 24 41 IPR018082 -
Bach6g00265 352 PRINTS Pollen allergen Amb family signature 323 346 IPR018082 -
Bach6g00265 352 PRINTS Pollen allergen Amb family signature 230 249 IPR018082 -
Bach6g00265 352 Gene3D - 1 345 IPR012334 -
Bach6g00265 352 SUPERFAMILY Pectin lyase-like 23 349 IPR011050 -
Bach6g00265 352 PANTHER PECTATE LYASE 18-RELATED 1 349 IPR045032 GO:0030570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00265 Bach-Chr6 1814001 1815231 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00265 32 291 Polysaccharide Lyase AT5G09280 68.846 1.46e-144 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00265 K01728 - gmx:100780437 593.578