Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00263 TCTCTTTCTACTTTGACTCCTCCATGTCCTCTGCTTCCCTGTATTCATCTTCCCAGACATTCTGCTTCTAATAATTAAAAATGACTGAACCAAGCTTTTCTGAATCTGCTAGCACCAGCAATTCTTCACCTCCCTCATCACATTTTCTCCCAAACTCTTGCGAAAAACAGGAAACAGGGTCCAAGGAAGAAAGCAGAGCCAAGAGACCCAGAGATTGTAACACGCACCCGGTTTATCATGGGGTCCGAATGCGAAGTTGGGGCAAATGGGTATCTGAAATTCGTGAACCCCGCAAGAAATCTCGTATCTGGCTTGGTACCTTCGCCACACCAGAAATGGCAGCACGAGCTCATGATGTTGCAGCTTTGAGCATTAAAGGCCAGGCAGCAATTCTCAACTTTCCACAAATAGTTGATATGCTTCCCAGACCAGTCACGTTGACCCCACGTGACATCCAAGCTGCTGCAGCAGAAGCAGCAGCCATGGTTAAATTCGACCCAGTAGTGCAATCAGATTCTTCTTCTTCTTCTTCATCAGCACCTCAATCATTACTAGAACAATCAGACTCATCGGAGCTGAGTGAGATAGTTGAATTGCCCAACATAGAGGAGAGCTTCGACACGATGGAATCGAGAACCGAGTTTATATTGATTGACTCGGTGGATAGTTGGGTGTATCCGGCAGTGGGGTTAGAAGATGTTGAATTCTCGGCTAATTTTTCCGAGGAATTATTCCCACAAGAGGATAGTTTCATTACAAGTAACTCTGAGATGTCACTCTGGGAATAAATGACTGAACCAAGCTTTTCTGAATCTGCTAGCACCAGCAATTCTTCACCTCCCTCATCACATTTTCTCCCAAACTCTTGCGAAAAACAGGAAACAGGGTCCAAGGAAGAAAGCAGAGCCAAGAGACCCAGAGATTGTAACACGCACCCGGTTTATCATGGGGTCCGAATGCGAAGTTGGGGCAAATGGGTATCTGAAATTCGTGAACCCCGCAAGAAATCTCGTATCTGGCTTGGTACCTTCGCCACACCAGAAATGGCAGCACGAGCTCATGATGTTGCAGCTTTGAGCATTAAAGGCCAGGCAGCAATTCTCAACTTTCCACAAATAGTTGATATGCTTCCCAGACCAGTCACGTTGACCCCACGTGACATCCAAGCTGCTGCAGCAGAAGCAGCAGCCATGGTTAAATTCGACCCAGTAGTGCAATCAGATTCTTCTTCTTCTTCTTCATCAGCACCTCAATCATTACTAGAACAATCAGACTCATCGGAGCTGAGTGAGATAGTTGAATTGCCCAACATAGAGGAGAGCTTCGACACGATGGAATCGAGAACCGAGTTTATATTGATTGACTCGGTGGATAGTTGGGTGTATCCGGCAGTGGGGTTAGAAGATGTTGAATTCTCGGCTAATTTTTCCGAGGAATTATTCCCACAAGAGGATAGTTTCATTACAAGTAACTCTGAGATGTCACTCTGGGAATAAGGGCAGGTGATGATGGTAGTTAATTGCACAATATTTAACTGTATAAAACTCAGTCTGTA 1555 0.4527 MTEPSFSESASTSNSSPPSSHFLPNSCEKQETGSKEESRAKRPRDCNTHPVYHGVRMRSWGKWVSEIREPRKKSRIWLGTFATPEMAARAHDVAALSIKGQAAILNFPQIVDMLPRPVTLTPRDIQAAAAEAAAMVKFDPVVQSDSSSSSSSAPQSLLEQSDSSELSEIVELPNIEESFDTMESRTEFILIDSVDSWVYPAVGLEDVEFSANFSEELFPQEDSFITSNSEMSLWE 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00263 235 ProSiteProfiles AP2/ERF domain profile. 51 108 IPR001471 GO:0003700|GO:0006355
Bach6g00263 235 SUPERFAMILY DNA-binding domain 51 109 IPR016177 GO:0003677
Bach6g00263 235 MobiDBLite consensus disorder prediction 1 29 - -
Bach6g00263 235 PRINTS Ethylene responsive element binding protein signature 74 90 IPR001471 GO:0003700|GO:0006355
Bach6g00263 235 PRINTS Ethylene responsive element binding protein signature 52 63 IPR001471 GO:0003700|GO:0006355
Bach6g00263 235 FunFam Ethylene-responsive transcription factor 2 50 109 - -
Bach6g00263 235 SMART rav1_2 51 114 IPR001471 GO:0003700|GO:0006355
Bach6g00263 235 MobiDBLite consensus disorder prediction 144 165 - -
Bach6g00263 235 MobiDBLite consensus disorder prediction 1 50 - -
Bach6g00263 235 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 31 182 - -
Bach6g00263 235 Gene3D AP2/ERF domain 51 110 IPR036955 GO:0003700|GO:0006355
Bach6g00263 235 CDD AP2 52 108 IPR001471 GO:0003700|GO:0006355
Bach6g00263 235 MobiDBLite consensus disorder prediction 30 50 - -
Bach6g00263 235 Pfam AP2 domain 50 100 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00263 Bach-Chr6 1802511 1803357 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00263 25 200 AP2-EREBP Transcription Factor Family AT5G11590 56.085 7.40e-61 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach6g00263 AP2 2.3e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00263 K09286 - gmx:100801780 263.462
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach6g00263 6 1802511 1803357 Bach6g00263 6 1802511 1803357 ECH