Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00256 ATGTCTACGCCATTAGAACATGATTACATAGGCTTAGCAGAGAACCCGTCCATGGAAAGAAGCTCTGAGAAAATTTCCTCTTCTGCTTCCTCTACCCTCTCCTCTGAGGATGAGAAGAGCTCTTCTATGAACTTCAAGGAAACAGAGCTCAGGCTTGGTCTCCCTGGCTGCAAATCTCCAGAGAGAAAATCTGCAACTGGGCTCTCTCTTTTTGGTAAGGATTTGCAGAATGGGTGTTCTTCTGCAAGCCCTTTGAAGAACCTCGTCTCTGGGGCTAAGAGGGGCTTTTCTGATGCTATTGATGGGTCTTCAGGGAAATGGGTTTTCTCTATGAGTGATGGATCTGAGGTTGATTTGGGAAAAGGTGCTAGCTTGTTCTCCCCCAGAGGTGGAAATGGTGGAAAGCCTCTTCTGGGTTTAGAGGGTAAAGCTAGTAGCCTGCATGGTTCTACTACCGCCCCTGCACAAAGCACCAAGGAGGTTGGAATAACTACTCAGACCGCAAAACCAGTTCTGGAGACGAAGCCTCAGGCTCCTAATGAGCATCTTGCTACTCCTGCTGCAAAGGCACAGGTTGTGGGATGGCCACCAATTAGATCTTTCCGAAAGAACTCCATGGCTTCTAATGCAACAAAGAACAATAATGAAGGTGAAGGCAAAGATGGGTTTGGTTGTCTCTATGTGAAGGTTAGCATGGATGGCGCCCCATATCTGAGAAAGGTTGATCTGAAAACCTACAAAAACTATGTGGAGCTTTCTTCTGCTCTTGAGAAGATGTTCAGCTGCTTTACCATTGGTCAATGCAGTTCTCGTGGGCTTCCGGGGAAAGATGGCCTTAGCGAGAGCTCTTTGAGGGATCTTCTCCATGGCTCTGAATATGTTCTTACATACGAAGATAAAGATGGAGATTGGATGCTTGTTGGTGATGTACCCTGGGAGATGTTCACTGACTCATGTAGGAGGCTAAGGATCATGAAAGGCTCCGAGGCAATTGGGCTAGCTCCAAGGGTCATGGAAAAATCCAGGAGCCAGACCTAG 1038 0.473 MSTPLEHDYIGLAENPSMERSSEKISSSASSTLSSEDEKSSSMNFKETELRLGLPGCKSPERKSATGLSLFGKDLQNGCSSASPLKNLVSGAKRGFSDAIDGSSGKWVFSMSDGSEVDLGKGASLFSPRGGNGGKPLLGLEGKASSLHGSTTAPAQSTKEVGITTQTAKPVLETKPQAPNEHLATPAAKAQVVGWPPIRSFRKNSMASNATKNNNEGEGKDGFGCLYVKVSMDGAPYLRKVDLKTYKNYVELSSALEKMFSCFTIGQCSSRGLPGKDGLSESSLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSEAIGLAPRVMEKSRSQT 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00256 345 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 43 332 IPR003311 GO:0005634|GO:0006355
Bach6g00256 345 MobiDBLite consensus disorder prediction 19 39 - -
Bach6g00256 345 Pfam AUX/IAA family 47 336 IPR033389 -
Bach6g00256 345 MobiDBLite consensus disorder prediction 1 47 - -
Bach6g00256 345 SUPERFAMILY CAD & PB1 domains 225 326 - -
Bach6g00256 345 FunFam Auxin-responsive protein 220 337 - -
Bach6g00256 345 ProSiteProfiles PB1 domain profile. 225 327 IPR000270 GO:0005515
Bach6g00256 345 Gene3D - 221 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00256 Bach-Chr6 1753998 1756268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00256 229 335 B3 DNA Binding Superfamily AT4G23980 31.776 5.64e-09 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bach6g00256 AUX_IAA 4.4e-91 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00256 K14484 - qsa:O6P43_018182 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach6g00256 6 1753998 1756268 Bach6g00256 6 1753998 1756268 ECH