Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00249 TTCCTCCTTAAAAAACATACCCATTCGTCATCACCACCCAACAAATAGCATCAAACGTTGCCAATGGGCGTGGACATGTCGAATAACCCACCTCCCACTTCTCACACCAAAGACTTCTTTGCCTCTCCAGCTCTCTCTCTTAGCCTTGCTGGAATTTGGCGCCATGCTGGGGCTCCGACAACGTCGGTGGCAACGGCGAACATGTCGGTGGAGGAGGGTGATGAGGGAAGCGGAGGAGTTGGTCGGCGAGAAGATACAGTTGAGATTAGTAGCGAGAACTCGGGCCCAGCGAGATCGAGATCAGATGATGAATTATTATTTGAAGGAGAAGGAGAGCATGAAGAAGATGATGGTGATGGAGACAAGAACAAGAAGAAGAAGAGGAAGAAATATCATAGGCACACTGCTGAACAGATCAGAGAAATGGAAGCACTTTTCAAAGAGTCACCACATCCTGATGAGAAGCAAAGGCAACAACTAAGCAAGCAACTAGGTCTTGCTCCAAGGCAAGTCAAGTTTTGGTTTCAAAATCGTCGAACCCAAATCAAGGCTATACAAGAACGTCATGAAAATTCTTTGCTAAAGACAGAAATTGATAAACTCAGAGAGGAAAATAAGGCCATGAGAGAGACCATAAACAAAGCTTGTTGCCCCAACTGTGGCATGGTCACCACTAGCAGAGATGCAGCCATGTCCACAGAAGAACAGCAACTACGTATCGAAAATGCCAAACTCAAAGCTGAGGTGGAGAAGCTCCGAGCAGCATTAGGGAAGTACCCACCGGGGACAGCCTCGCCTTCGTGTTCTGCAGGCAATGATCAAGAGAATAGAAGCTCTTTGGAATTTTACACTGGAATTTTTGGACTTGAGAAATCAAGGATCATGGAGATAGTTAACCAAGCAATGGAAGAGCTCATAAAAATGACAACAATGGGGGATCCATTGTGGGTTCGCAGTGTTGAGACTGGTCGTGAAATTCTTAACTATGATGAATATGTCAAAGAGTTCTCTGCTGAAGATTTGAGCAGTCTAAAGCCAAAGAGATCCATTGAAGCCTCAAGAGAAACTGGGGTCGTTTTCATGGACCTCCAGAGGCTTGTCCAAAGTTTTTTGGACGTGAATCAATGGAAGGAAATGTTTCCATGCTTGATATCAAAGGCAGCAACCGTTGATGTTATATGCAATGGAGAAGGTGCAAACGGAAATGGTGCAGTGCAACTGATGTTTGCTGAGCTGCAAATGCTCACACCCATGGTGCCCACCAGGGAAGTGTATTTTGTCCGCTATGGCAAACAATTGAATGCTGAACAGTGGGCAATTGTTGATGTGTCAATAGATAAAGTAGAAGACAATATTGATGCATCCCTGGTGAAATGCAGAAAACGCCCATCTGGTTGCATTATTGAGGATAAGTCAAATGGCCATTGCAAGGTAATCTGGGTGGAGCACTTAGAATGCCAGAAAAGCACGGTTCACACAATGTATCGCACCGTGGTGAACAGTGGCATAGCTTTCGGGGCAAAGCACTGGATTGCGACGCTTCAACTTCAATGCGAACGTCTAGTTTTCTGCATGGCAACAAATGTTCCGATGAAGGATTCAACTGGTGTTGGCACATTAGCTGGGAGGAAAAGCATTTTGAAGTTGGCACAAAGAATGACATGGAGTTTCTGCCATGCAATAGGAGCATCAAGCTTCCATACATGGACCAAAGTGACAAGTAAAACAGGAGAAGATATCAGAGTAAGTTCGAGGAAGAACTTGAACGATCCTGGAGAACCTCTTGGAGTAATCTTGTGCGCAGTTTGTTCTGTGTGGTTGCCTGTATCTCCAAGTGTTGTATTCGATTTCTTGAGGGATGACGCCCGCCGCAACGAGTGGGATATCATGTCAAGTGGGGGATCAGTGCAATCCATTGCAAACCTAGCCAAAGGACAAGACAGGGGCAATGCAGTAACCATACAAACAATCAAATCAAAAGAAAACAGTATGTGGGTACTGCAAGATAGTTGCACAAATGCTTACGAATCAATGGTGGTCTATGCTCCTGTTGACATTACTGGTATGCAGGCTGTAATGACAGGTTGTGATTCAAGCAATCTTGCTATACTGCCCTCCGGATTCTCAATCCTTCCTGATGGACTAGAGACAAGGCCATTAGTAATTACTTCGAGGCAGGAAGAAAAGAGCACAGAAGGAGGATCATTATTCACAATAGTATTCCAGATCCTTACAAATACATCACCAACAGCTAAGCTAACGGCGGAGTCTGTGGAATCAGTCAACACTCTTATATCTTGTACATTAAGAAATATCAGAACAAGTTTACAATGTGAGGATAGTTAGCCAATATAAGATTATTAGGCTAGATAGACACTAAACAACTGTGTGAAGTTTTTAGGCTTTCTATCCCCTTCTTAAAGTCAGTATCTAGCTTTGCAGAAATAGCTTGCTTTTT 2458 0.441 MGVDMSNNPPPTSHTKDFFASPALSLSLAGIWRHAGAPTTSVATANMSVEEGDEGSGGVGRREDTVEISSENSGPARSRSDDELLFEGEGEHEEDDGDGDKNKKKKRKKYHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKTEIDKLREENKAMRETINKACCPNCGMVTTSRDAAMSTEEQQLRIENAKLKAEVEKLRAALGKYPPGTASPSCSAGNDQENRSSLEFYTGIFGLEKSRIMEIVNQAMEELIKMTTMGDPLWVRSVETGREILNYDEYVKEFSAEDLSSLKPKRSIEASRETGVVFMDLQRLVQSFLDVNQWKEMFPCLISKAATVDVICNGEGANGNGAVQLMFAELQMLTPMVPTREVYFVRYGKQLNAEQWAIVDVSIDKVEDNIDASLVKCRKRPSGCIIEDKSNGHCKVIWVEHLECQKSTVHTMYRTVVNSGIAFGAKHWIATLQLQCERLVFCMATNVPMKDSTGVGTLAGRKSILKLAQRMTWSFCHAIGASSFHTWTKVTSKTGEDIRVSSRKNLNDPGEPLGVILCAVCSVWLPVSPSVVFDFLRDDARRNEWDIMSSGGSVQSIANLAKGQDRGNAVTIQTIKSKENSMWVLQDSCTNAYESMVVYAPVDITGMQAVMTGCDSSNLAILPSGFSILPDGLETRPLVITSRQEEKSTEGGSLFTIVFQILTNTSPTAKLTAESVESVNTLISCTLRNIRTSLQCEDS 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00249 760 ProSitePatterns 'Homeobox' domain signature. 139 162 IPR017970 GO:0000981|GO:0006355
Bach6g00249 760 Pfam Homeodomain 107 162 IPR001356 GO:0003677
Bach6g00249 760 SMART START_1 275 499 IPR002913 GO:0008289
Bach6g00249 760 ProSiteProfiles 'Homeobox' domain profile. 104 164 IPR001356 GO:0003677
Bach6g00249 760 FunFam Homeobox-leucine zipper protein GLABRA 2 275 498 - -
Bach6g00249 760 Gene3D - 92 176 - -
Bach6g00249 760 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 103 755 IPR042160 -
Bach6g00249 760 Coils Coil 214 234 - -
Bach6g00249 760 Pfam START domain 276 499 IPR002913 GO:0008289
Bach6g00249 760 CDD homeodomain 111 162 IPR001356 GO:0003677
Bach6g00249 760 CDD START_ArGLABRA2_like 270 498 - -
Bach6g00249 760 FunFam Homeobox-leucine zipper protein HDG1 92 180 - -
Bach6g00249 760 Gene3D - 274 496 IPR023393 -
Bach6g00249 760 Coils Coil 163 190 - -
Bach6g00249 760 ProSiteProfiles START domain profile. 266 502 IPR002913 GO:0008289
Bach6g00249 760 MobiDBLite consensus disorder prediction 41 115 - -
Bach6g00249 760 SUPERFAMILY Bet v1-like 268 499 - -
Bach6g00249 760 SUPERFAMILY Homeodomain-like 97 165 IPR009057 -
Bach6g00249 760 SUPERFAMILY Bet v1-like 521 722 - -
Bach6g00249 760 SMART HOX_1 106 168 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00249 Bach-Chr6 1676592 1681580 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00249 68 759 Homeobox Transcription Factor Family AT1G79840 66.572 0.0 936
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bach6g00249 START 1.9e-57 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00249 K09338 - qsu:111988083 1280.39