Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00235 ATGGCAACAAATGAATTTTCCAACTCGAATCTCGTTGGTCAAGGTGGTTTTGGCAATGTCTATAAAGGAGCCCTACGAAATGGAAAAACTGTAGCAGTTAAGCAACTGAAATGTGGAAGCGCACAGGGTGAACGAGAATTCCAGGCAGAAGTTGAGATCATCAGCCGTGTCCATCACAGACATCTTGTTTCCCTAGTTGGATACTGTATGGTTGGCACCCAGAGGGTGCTTGTTTATGAGTTTCTCCCAAATAATACGCTGGAATTTCATTTGCATGGAAAGGACAGACCACCTATGGACTGGTCAACAAGGATGAAGATTGCTATTGGATCTGCAAAAGGATTGGCCTATCTACATGAGGATTGTCAGCCCAAAATTATACATGGCGACATCAAGGCATCTAACATTCTTCTTGATAATGATTTTGAGGCAAAGGTTGTAGATTTTGGACTAGCCAAATTTTCACCAGATGCTAATACTCATGTTTCTACTCGAGTAATGGGAACCTTTGGATACTTGGCTCCCGAATATGCTAGTAGTGGAAAACTCACTGATAAGTCTGATGTTTTCTCCTTTGGTGTTGTGCTTTTGGAGTTAATTACTGGACGAAAACCCGTTGATAGAGCTGAGTCTTTCCCTGATGACAGCATGGTTGAATGGGCAAGACCTTTACTCTCCCAAGCGTTGGAAAATGGCAGCCTTGAACTGCTTGCCGATCCAAGGTTGCAGAAGAATTACAACTCTGATGAGATGATTCGAATGGTTGCTTGTGCTTCATCTTGTGTGCGAAATTCAGCCAGGCGTCGGCCTCAAATGAGCCAGGTTGTTCGAGCTCTAGAAGGAAATATTTCCCTGGATGATCTGAATGAAGGGATAACACCTGACCACAGTAGAGCGTTTGGTTCCTTTGAAAGTTCATGTTATGATACTGCCCCATACAAAAAAAACCTAGAGAACTGCCGAAAGCTTGCACTCGAAGAGACAAGTGAGTACGGTGGACCAAGCAGCGATTATAGTCATCATACGTCTGCCTCAAGCAGTGATGGCCAGCAAAACTCGCAAGTGATAAACATGGAAAATATGAAGAGCAACACCCAAACTTGTGGTGAAATACCTTGA 1119 0.4352 MATNEFSNSNLVGQGGFGNVYKGALRNGKTVAVKQLKCGSAQGEREFQAEVEIISRVHHRHLVSLVGYCMVGTQRVLVYEFLPNNTLEFHLHGKDRPPMDWSTRMKIAIGSAKGLAYLHEDCQPKIIHGDIKASNILLDNDFEAKVVDFGLAKFSPDANTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSFGVVLLELITGRKPVDRAESFPDDSMVEWARPLLSQALENGSLELLADPRLQKNYNSDEMIRMVACASSCVRNSARRRPQMSQVVRALEGNISLDDLNEGITPDHSRAFGSFESSCYDTAPYKKNLENCRKLALEETSEYGGPSSDYSHHTSASSSDGQQNSQVINMENMKSNTQTCGEIP 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00235 372 ProSiteProfiles Protein kinase domain profile. 6 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach6g00235 372 MobiDBLite consensus disorder prediction 332 353 - -
Bach6g00235 372 Pfam Protein tyrosine and serine/threonine kinase 10 279 IPR001245 GO:0004672|GO:0006468
Bach6g00235 372 ProSitePatterns Protein kinases ATP-binding region signature. 12 34 IPR017441 GO:0005524
Bach6g00235 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Bach6g00235 372 CDD STKc_IRAK 12 281 - -
Bach6g00235 372 FunFam Proline-rich receptor-like protein kinase PERK1 82 290 - -
Bach6g00235 372 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 2 323 IPR047117 -
Bach6g00235 372 MobiDBLite consensus disorder prediction 328 353 - -
Bach6g00235 372 Gene3D Transferase(Phosphotransferase) domain 1 82 291 - -
Bach6g00235 372 Gene3D Phosphorylase Kinase; domain 1 1 81 - -
Bach6g00235 372 FunFam receptor-like protein kinase FERONIA 1 81 - -
Bach6g00235 372 SUPERFAMILY Protein kinase-like (PK-like) 2 279 IPR011009 -
Bach6g00235 372 SMART serkin_6 6 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00235 Bach-Chr6 1621697 1624670 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00235 3 349 Trihelix Transcription Factor Family AT1G70460 59.885 1.74e-146 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Bach6g00235 PK_Tyr_Ser-Thr 2.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00235 - - qsa:O6P43_018150 557.755