Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00208 TATCTGCTTCTACTTTGTTGGACTGCTTTAGATGGATGTTACCTCTCAGGGACCAAATAGCAACACTCAAACTGATCATTATCCTTTGCTGATGGAGCAACTGGAAAATTATAATGGCCATCAGCACGTAGTTGATATTTCAAGGAATAGTGATGCTTTATCCAGCTTATCTCATGATGATCAACATCCTGAAATGCATTTATCACAGAATATAGATCAACTGTCCAATGGCACAATAGTTACTGGTCATCAAGCATCTTCCTCTTCCTCATCCATATTTAATACTAGGAATTCCTCTTCAACAAGAAGAGGTGAGGGCTATGGTCATCGCCGAAGGAGCCCATTGAATTCTGGACTATGGATTTCTGTTGAGCTTGTTGTCTCTGTGAGTCAGATCATAGCATCTATTATTGTCCTGTCATTATCCAGAAATGAAAATCCACAAGCCCCATTGTTTGAATGGATTGTGGGTTATGCATCTGGTTGTGTTGCTACACTTCCTATTCTATACTGGCGTTACCGAAACCGTAATCAAAACACTGAACAAGATATCTCTCAACCATCTCAAGGGTCTTCTGGAAGCAATCCTTCAGAACCTACTTCTTATACGGCCATCTCCGTTGCTCATTTCTCGGATGAGGAGATTAGTCATCCTACAGAATCAGCTGCAAGAAACACTATGATCCCGGGAGCTTTTAGTTCTAGGGTGAATGGATTAGTAGACCATTTCAAGATGGCCTTAGATTGCTTCTTTGCAGTTTGGTTTGTTGTAGGCAATGTATGGATCTTTGGAGGTCACTCTTCTCCTTCTGATGCTCCAAAAATATATAGGTTGTGTATAGTGTTTCTTACCTTTAGCTGCATTGGATATGCTATGCCCTTTATATTATGTGCAACTATTTGTTGCTGCCTACCTTGCCTAATCTCTGTTCTGGGCATCCGGGAGGATTTTTCTCAAGCTAGAGGAGCGACAGTAGAATCTATTAATGCTCTGCCAACCTACAAGTTCAAATTGAAGAAAAATGAAAACATTGATGGTCATGATGTCAACACAGCTGTAGATGAAGGTGGGATCTTGGCTGCCGGAACAGAAAAGGAGCGGACCATATCAGGAGAAGATGCTGTTTGTTGCATTTGCTTGGCAAAATATGGAGACAATGATGAGCTTAAGGAGTTGCCCTGTTTTCATGTCTTTCACGTAGAGTGTGTCGACAAATGGTTAAAGATAAATGCATCCTGTCCTCTTTGTAAAAGTGAAGTTGGCACCCCTCCTTCGGAGAGGGACTCCAGTCAGCATTAGATGAGAATCGGTACCAAAGGTGCGTTACAATTCTACATGGCATAGTAATTGCATTCTTGAAGGCACTTCCCCAATGAAGTTGCAGCTTTTCAAGATTTTACACAGTTTCTGGAACAGCTGCCATCCGCTTTTCAAAGTGATATATGATGTGATCTGAGAGCCAAAGTTTTATTTCATAGCACGGCATCCCTCCCCCTCCCCCCAGTGCTCCGCCACCTTTCCCCGTTTTGACGTGTTTTACGAAGCCCTGTTCCGTAGAAAATAGCCTACATGTACCTTTTTGTTGTCTTTACTGTTCACTTAGCAGTCCTCAAAATGTATGTGTACATAACATTATGCAATTTAGAGCTCTAATACAAGCTTCAGTTATTT 1672 0.4157 MDVTSQGPNSNTQTDHYPLLMEQLENYNGHQHVVDISRNSDALSSLSHDDQHPEMHLSQNIDQLSNGTIVTGHQASSSSSSIFNTRNSSSTRRGEGYGHRRRSPLNSGLWISVELVVSVSQIIASIIVLSLSRNENPQAPLFEWIVGYASGCVATLPILYWRYRNRNQNTEQDISQPSQGSSGSNPSEPTSYTAISVAHFSDEEISHPTESAARNTMIPGAFSSRVNGLVDHFKMALDCFFAVWFVVGNVWIFGGHSSPSDAPKIYRLCIVFLTFSCIGYAMPFILCATICCCLPCLISVLGIREDFSQARGATVESINALPTYKFKLKKNENIDGHDVNTAVDEGGILAAGTEKERTISGEDAVCCICLAKYGDNDELKELPCFHVFHVECVDKWLKINASCPLCKSEVGTPPSERDSSQH 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00208 422 SMART ring_2 366 406 IPR001841 -
Bach6g00208 422 MobiDBLite consensus disorder prediction 170 189 - -
Bach6g00208 422 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 348 412 IPR013083 -
Bach6g00208 422 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 21 410 - -
Bach6g00208 422 CDD RING-H2_RNF6-like 366 407 - -
Bach6g00208 422 MobiDBLite consensus disorder prediction 73 92 - -
Bach6g00208 422 SUPERFAMILY RING/U-box 359 414 - -
Bach6g00208 422 ProSiteProfiles Zinc finger RING-type profile. 366 407 IPR001841 -
Bach6g00208 422 SMART ringv_2 365 407 IPR011016 GO:0008270
Bach6g00208 422 MobiDBLite consensus disorder prediction 73 102 - -
Bach6g00208 422 FunFam E3 ubiquitin-protein ligase 349 415 - -
Bach6g00208 422 Pfam Ring finger domain 366 407 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00208 Bach-Chr6 1416855 1421256 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00208 1 411 C3H Transcription Factor Family AT1G80400 57.627 3.29e-168 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00208 - - gmx:100819516 654.44