Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00207 ATGGCCAAAGAAGATCTTGGACTTGAGATCACAGAACTAAGGTTGGGGTTGCCCGGTGGGGATAAGAATGAGAAGAAGAGGGTTTTCTCGGAGATTTCCGGTAGCGATGAAAACAGCTGCTCCGATGAACCGAAACTACCGGCAAAGAATCAAGTTGTGGGGTGGCCTCCGGTGTGCTCGTACCGTAAGAGGAATAGCTTCAAAATGTACGTGAAGGTTAGCATGGACGGGGCTCCTTTCTTGCGTAAAATTGATTTGGGCATGCATAAGGGATACACGGACTTAGCTTTGGCCATGGAGAAGCTCTTTGGTTGCCATGGAATTGGCGAAGCATTGAAAGATGCGGACAACACTGAGCACGTTCCCGTCTACGAGGACAAAGATGGTGATTGGATGCTGGTTGGCGATGTCCCTTGGCAAATGTTCATTGAATCATGCAAGAGGCTGAGGATTATGAAGAAATCAGATGCAAAGGTCTTTGGTTTGCAACCGAAAGGGTCCCTAAAGCTATTCATAGAAGACGTGAAAAAGTAG 534 0.4738 MAKEDLGLEITELRLGLPGGDKNEKKRVFSEISGSDENSCSDEPKLPAKNQVVGWPPVCSYRKRNSFKMYVKVSMDGAPFLRKIDLGMHKGYTDLALAMEKLFGCHGIGEALKDADNTEHVPVYEDKDGDWMLVGDVPWQMFIESCKRLRIMKKSDAKVFGLQPKGSLKLFIEDVKK 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00207 177 ProSiteProfiles PB1 domain profile. 68 156 IPR000270 GO:0005515
Bach6g00207 177 FunFam Auxin-responsive protein 63 164 - -
Bach6g00207 177 Gene3D - 63 164 - -
Bach6g00207 177 SUPERFAMILY CAD & PB1 domains 65 153 - -
Bach6g00207 177 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 6 157 IPR003311 GO:0005634|GO:0006355
Bach6g00207 177 Pfam AUX/IAA family 68 158 IPR033389 -
Bach6g00207 177 Pfam AUX/IAA family 40 64 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00207 Bach-Chr6 1406439 1408864 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00207 54 176 B3 DNA Binding Superfamily AT4G23980 34.146 4.13e-13 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bach6g00207 AUX_IAA 7.6e-39 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00207 K14484 - gmx:100811879 275.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach6g00207 6 1406439 1408864 Bach14g00133 14 906675 909424 BWGD