Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00174 ATGGCCGCTTCTGCGTCTGGTTGCCAATTTTACACTGCTCCCCTAGGTTATGTTGCTGAAAGGCCTTTCCTCCAGTCTCGGTTTCCCCCTAAAGATAAAGAAATTGAATGTTCATCTGACATAGAACGCTCACCTTTCAAGAAGCCCCGGATTTCAGGTACACTTTCAAATCCTGGGATGCAACATATGTTGAACAACGCAACGACCCGTTATTTGAAGACCCAACTGTGCCGGAATTTCAGATTCGGTCAATGTAATTATGGGTCCAGATGCAAATACGCCCATGGAATCAGAGAACTTAAGAGGCAAGGAGATGTAACGGGGGCAAATCCATTGGCTGGAACTTCTTATAGTAATCATAAATTGTCAAAACCATGTGGAATGTTCTCCGATGCAATAAGGTCCACAGTTAAAGACCAACCCCATTTCCTTCCTTTAATGCCTGAGAACATGAACTCGAGAGAGTTTTCAATGGAAACAATGATTGATGATGGAGCTGCTGAGCATGACATAGATGGGTATGGTCAATCAGAATGCGAGAAGGTTTTCAATGACAGTTTTGATGCTGAAGTGAATCGAAAGAGAGTGTTGCTGAAAACACGGATGTGCCACAAGTGGAACATGAAAAGGCAATGCCCATATGGAAAGAATTGTCGCTTTGCTCATGGACTAGCAGAGATCAGAAAGCTTGATTGCTACTCTTCTGCAAAATACAGAGCGGTGCTAACTTCTACTGCTAGTACAAATGCATCAACTGCTATAGTTGCAAGTGACTCTTTGCCTAAGAAGGAATTGTATGTCACGAAATGCATCTTCAAGAGGAATGCACTGCAGAAAATCAGTCGCGTCTATGCTGATTGGATTGAAGATGTGCCTCCACATCATGCCTCTCCGACCGAAGTGCGCTAG 909 0.4378 MAASASGCQFYTAPLGYVAERPFLQSRFPPKDKEIECSSDIERSPFKKPRISGTLSNPGMQHMLNNATTRYLKTQLCRNFRFGQCNYGSRCKYAHGIRELKRQGDVTGANPLAGTSYSNHKLSKPCGMFSDAIRSTVKDQPHFLPLMPENMNSREFSMETMIDDGAAEHDIDGYGQSECEKVFNDSFDAEVNRKRVLLKTRMCHKWNMKRQCPYGKNCRFAHGLAEIRKLDCYSSAKYRAVLTSTASTNASTAIVASDSLPKKELYVTKCIFKRNALQKISRVYADWIEDVPPHHASPTEVR 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00174 302 FunFam Zinc finger CCCH domain-containing protein 66 102 - -
Bach6g00174 302 ProSiteProfiles Zinc finger C3H1-type profile. 71 98 IPR000571 GO:0046872
Bach6g00174 302 Gene3D - 65 103 - -
Bach6g00174 302 Gene3D - 192 229 - -
Bach6g00174 302 SUPERFAMILY CCCH zinc finger 197 228 IPR036855 GO:0046872
Bach6g00174 302 SUPERFAMILY CCCH zinc finger 70 101 IPR036855 GO:0046872
Bach6g00174 302 SMART c3hfinal6 197 224 IPR000571 GO:0046872
Bach6g00174 302 SMART c3hfinal6 71 97 IPR000571 GO:0046872
Bach6g00174 302 PANTHER CCCH ZINC FINGER/TIS11-RELATED 52 131 IPR045877 GO:0003729
Bach6g00174 302 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 73 96 IPR000571 GO:0046872
Bach6g00174 302 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 199 223 IPR000571 GO:0046872
Bach6g00174 302 ProSiteProfiles Zinc finger C3H1-type profile. 197 225 IPR000571 GO:0046872
Bach6g00174 302 FunFam zinc finger CCCH domain-containing protein 15-like 191 230 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00174 197 228 C3H Transcription Factor Family AT1G68200 50.000 2.93e-06 46.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bach6g00174 zf-CCCH 2e-06 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00174 - - pcin:129288651 168.703