Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00158 ATGGTGCAATCAAAGAAATTCAGAGGTGTCAGACAACGCCACTGGGGCTCTTGGGTTTCTGAGATTCGTCACCCATTACTGAAGAAGAGGGTGTGGCTTGGCACATTTGAAACGGCTGAAGAGGCTGCAAGAGCATATGATGAAGCAGCCATTTTGATGAGTGGAAGAAACGCAAAAACAAACTTCCCACTGGTCAATGACCAAATGGGCAATCCAAGTTCTACTTCTTCCTCTGCCAAAACATTATCTGCTGCTCTCAGTGCAAAGCTGAGGAAGTGCTGCAAATCCCCCTCACCTTCTCTCACTTGCCTGAGGCTTGACACAGAGAACTCCCACATCGGAGTTTGGCAGAAGCGAGCAGGACCTCGTTCTGACTCAAACTGGGTCATGATGGTTCAGCTAGAAAAGAAAAATCTCGGAGATTCTGAGTCAGCATTGCCAGTGCCAAATTGTGATACTCCAGAGAAGGTAAAACCAGCAGAAAGCAATGGCTTGGATGAAGAACAGAGTGTGGCCTTGCAGATGATTGAAGAACTCCTCAACATGAATTAA 552 0.4674 MVQSKKFRGVRQRHWGSWVSEIRHPLLKKRVWLGTFETAEEAARAYDEAAILMSGRNAKTNFPLVNDQMGNPSSTSSSAKTLSAALSAKLRKCCKSPSPSLTCLRLDTENSHIGVWQKRAGPRSDSNWVMMVQLEKKNLGDSESALPVPNCDTPEKVKPAESNGLDEEQSVALQMIEELLNMN 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00158 183 Pfam AP2 domain 6 54 IPR001471 GO:0003700|GO:0006355
Bach6g00158 183 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Bach6g00158 183 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Bach6g00158 183 MobiDBLite consensus disorder prediction 140 166 - -
Bach6g00158 183 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Bach6g00158 183 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Bach6g00158 183 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Bach6g00158 183 CDD AP2 5 63 IPR001471 GO:0003700|GO:0006355
Bach6g00158 183 SUPERFAMILY DNA-binding domain 6 64 IPR016177 GO:0003677
Bach6g00158 183 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 3 144 - -
Bach6g00158 183 FunFam Ethylene-responsive transcription factor 2 5 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00158 Bach-Chr6 1117288 1118020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00158 1 183 AP2-EREBP Transcription Factor Family AT1G15360 62.189 1.79e-80 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Bach6g00158 AP2 5.7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00158 - - qsa:O6P43_027873 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach6g00158 6 1117288 1118020 Bach6g00158 6 1117288 1118020 ECH