Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00100 ATGTCAGGTGAAGAAGCTGTTGTTCCAGCTGAGACAGCTGCTGCAATTCCAGGTGCAAAAGTGATTGAGAAGCATGCTGCACAACTCTGTGTTCTGGCGGAAGATTGTGACCAACCTGACTATGTTAAGCTGGTCAAAGCCCTTTGTGCTGAGCATAATGTTAGCCTCTTGACAGTTCCAAATGCAAAGACCCTTGGAGAGTGGGCTGGTTTATGCAAGATAGATTCAGAAGGCAAGGCTAGGAAGGTAGTCGGTTGTGGCTGTGTGGTTGTCAAGGATTTTGGAGAGGAACATGAAGCCTATAATGTCGTGTTGCAGCATGTGAAATCACACTGA 336 0.4673 MSGEEAVVPAETAAAIPGAKVIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVSLLTVPNAKTLGEWAGLCKIDSEGKARKVVGCGCVVVKDFGEEHEAYNVVLQHVKSH 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00100 111 SUPERFAMILY L30e-like 19 109 IPR029064 -
Bach6g00100 111 PRINTS Ribosomal protein S12E family signature 15 31 IPR000530 GO:0003735|GO:0005840|GO:0006412
Bach6g00100 111 PRINTS Ribosomal protein S12E family signature 81 94 IPR000530 GO:0003735|GO:0005840|GO:0006412
Bach6g00100 111 PRINTS Ribosomal protein S12E family signature 56 77 IPR000530 GO:0003735|GO:0005840|GO:0006412
Bach6g00100 111 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 19 90 IPR004038 -
Bach6g00100 111 Gene3D - 15 111 IPR029064 -
Bach6g00100 111 PANTHER 40S RIBOSOMAL PROTEIN S12 18 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00100 Bach-Chr6 754442 755745 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00100 19 111 Cytoplasmic Ribosomal Protein Gene Family AT2G32060 76.344 6.21e-50 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00100 K02951 - gmx:100305687 191.045