Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach6g00093 TTTCTCTCACACTCTCTTTCCACCTAGTTTCCTTCTCCAACTTGAGCTTATACATTTCAACTTCTCTTTATATGCTTGTCTCACTTGATTTACTCAAGGGAAGTCTGAAGCTTTGAGCTAGATACTCATCTGGGTTTTTCTGCAGTAAGAGCTTTTGTCACGAGCTTAATTTTCTTTGAAGTTGTACAGCTTAATTCGCTTGCAAATTGATTGAGAAGCACTTTTTCGAGTCTAATTTGGTAAGCTATGGATTATTCTTCATGGATAAATACTTCCTTGGATCTCAACATTAATCCTCTCAGAGTTCACGAAGAAGTTCCCAAAAAGGAGATAGAAAGCAATTTTTTTTCATTGGGGAGGAAGCCTTCTGTAAAAGAAGAGTCTGCTGGTGCCCTGGTAGAGGAATTGAAGAGGGTGAGTGCAGAAAACAAGAAGTTGACAGAAATGCTCACAGAGATGTGTGAGAATTACAACACTTTGCGAAACCACTTGATGGAATATATGAGAAAGAATCCAGAAAAGGAGTCAAGCCCATCAAAGAAAAGAAAGTCTGAAAGCAGCAATAACAATAGTAATCTAGTGGGAATTAATGGAAACTCTGAGAGCAGCTCAACTGATGAAGAATCATGCAAGAAGCCAAGGGAAGAGACTGTCAAAGCAAAAACTTCAAGAGTTTATGTCAGGACTGAGTCATCTGATACAAGCCTCATTGTAAAGGATGGATATCAGTGGAGGAAATATGGACAAAAGGTGACAAGAGATAATCCATCTCCAAGAGCATACTTCAAATGCTCTTTTGCTCCAAGCTGCCCCGTCAAAAAGAAGGTGCAAAGAAGTGTGGATGATCAGTCTATTTTGGTGGCAACTTATGAAGGAGAGCACAATCATCCTCAACCTTCTCATATGGAGGCCACATCTGGTTCCAACCGTTCTGCCCTTGGTTCGGTACCATGTTCAGCATCTCTGAGCTCTTCAGGGCCAACAGTTACCCTTGACTTGACAAAATCTAAGTCCACCAATGACTCCAAAGTTCCAAAACCAAAGATTGATTCGCCCGAAGTGCCACAGATTCTGGTGGAACAGATGGCTACTTCCTTGACAAAGGATCCCAATTTCAGAGCAGCACTTGTCGCTGCTATTTCAGGAAAAATGTTGCACAAGTAGAGAGAAATTGGTGAATGGCATTGTTGCTATCTTAGTGCAAACTTTCAAGTACTCCATAAATTGAAAAGCATAGGATCTCTATGTAAATACAACATAGGAAATTGGGACAAATTCCTCAATGTGACCCTTTAAGTGGGAAACTGGAAATTGAGTTCCAATACAGGATAGCGCGTTGAGCAGATTAAAAACGAACTGCCAAGTTCAGTTCAGTGTTTTCTGTTCTTCTGCATCACTGTAAAGATCTAGGAGAGGTCAAATTGGA 1426 0.4053 MDYSSWINTSLDLNINPLRVHEEVPKKEIESNFFSLGRKPSVKEESAGALVEELKRVSAENKKLTEMLTEMCENYNTLRNHLMEYMRKNPEKESSPSKKRKSESSNNNSNLVGINGNSESSSTDEESCKKPREETVKAKTSRVYVRTESSDTSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVDDQSILVATYEGEHNHPQPSHMEATSGSNRSALGSVPCSASLSSSGPTVTLDLTKSKSTNDSKVPKPKIDSPEVPQILVEQMATSLTKDPNFRAALVAAISGKMLHK 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach6g00093 305 MobiDBLite consensus disorder prediction 101 122 - -
Bach6g00093 305 SUPERFAMILY WRKY DNA-binding domain 152 217 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bach6g00093 305 SMART WRKY_cls 156 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach6g00093 305 Coils Coil 47 74 - -
Bach6g00093 305 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 42 302 IPR044810 GO:0003700
Bach6g00093 305 MobiDBLite consensus disorder prediction 217 256 - -
Bach6g00093 305 Pfam WRKY DNA -binding domain 157 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach6g00093 305 ProSiteProfiles WRKY domain profile. 151 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach6g00093 305 MobiDBLite consensus disorder prediction 209 270 - -
Bach6g00093 305 MobiDBLite consensus disorder prediction 123 141 - -
Bach6g00093 305 Gene3D WRKY domain 138 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bach6g00093 305 MobiDBLite consensus disorder prediction 88 141 - -
Bach6g00093 305 FunFam WRKY transcription factor 40 141 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach6g00093 Bach-Chr6 706886 708882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach6g00093 4 305 WRKY Transcription Factor Family AT1G80840 55.696 7.49e-108 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bach6g00093 WRKY 1.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach6g00093 - - gmx:100798375 452.981